RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 OR10H2O60403 315 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 CALCRP30988 508 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 DEFB110Q30KQ9 67 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 JAZF1Q86VZ6 243 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 MCATQ8IVS2 390 aaKnown RBP18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 CDRT4Q8N9R6 151 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 OR14C36Q8NHC7 312 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 PPP1R1CQ8WVI7 109 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 GAL3ST3Q96A11 431 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 SPACA7Q96KW9 195 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 SLC22A11Q9NSA0 550 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 CXorf51AA0A1B0GTR3 108 aa18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 F8W036 122 aa18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 CXCL10P02778 98 aa18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 CTSBP07858 339 aa18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 BLOC1S1P78537 153 aa18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 CEBPEQ15744 281 aa18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 PABPC1L2AQ5JQF8 200 aa18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 OR6N1Q8NGY5 312 aa18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 SRMSQ9H3Y6 488 aa18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 SERTAD3Q9UJW9 196 aa18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 OR2AT4A6NND4 320 aa18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 H0Y8X5 98 aa18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 SULT1C2O00338 296 aa18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 HLA-AP01891 365 aaKnown RBP18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 CEACAM5P06731 702 aa18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 VAMP1P23763 118 aa18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 CBX5P45973 191 aa18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 CTXN1P60606 82 aa18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 SKP1P63208 163 aa18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 FCRL6Q6DN72 434 aa18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 C3orf33Q6P1S2 294 aa18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 TMEM17Q86X19 198 aa18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 OR4C3Q8NH37 302 aa18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 CCDC74AQ96AQ1 378 aa18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 MOGAT1Q96PD6 335 aa18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 ZNF275Q9NSD4 429 aaPredicted RBP18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 C14orf105Q9NVL8 296 aa18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 DNAJB12Q9NXW2 375 aaKnown RBP18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 COMMD9Q9P000 198 aa18.62■□□□□ 0.57
MAP1LC3B-206ENST00000564844 ZNF705EA8MWA4 302 aaPredicted RBP18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 ABCD4O14678 606 aa18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 UPK3AO75631 287 aa18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 CALCBP10092 127 aa18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 PBX2P40425 430 aa18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 ARFIP1P53367 373 aa18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 B2MP61769 119 aa18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 SLC22A6Q4U2R8 563 aa18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 LINC01590Q5TEZ4 76 aa18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 VITQ6UXI7 678 aa18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 GABRG1Q8N1C3 465 aa18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 PATE1Q8WXA2 126 aa18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 FBXO17Q96EF6 278 aa18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 TREM1Q9NP99 234 aa18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 FANCFQ9NPI8 374 aa18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 C1QTNF3-AMACRE9PGA6 284 aa18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 FARS2O95363 451 aaKnown RBP18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 PLGP00747 810 aaPredicted RBP18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 RPA2P15927 270 aa18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 ADCYAP1P18509 176 aa18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 AKR1C3P42330 323 aa18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 C2orf27AQ580R0 203 aa18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 ZNF425Q6IV72 752 aa18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 JMJD6Q6NYC1 403 aaPredicted RBP18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 HERVK_113Q902F9 699 aa18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 CAPNS2Q96L46 248 aa18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 SLC25A32Q9H2D1 315 aa18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 FGF22Q9HCT0 170 aa18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 PHPT1Q9NRX4 125 aaPredicted RBP18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 FAM96BQ9Y3D0 163 aa18.61■□□□□ 0.57
MAP1LC3B-206ENST00000564844 SOX1O00570 391 aaPredicted RBP18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 ADH1CP00326 375 aa18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 DCNP07585 359 aaKnown RBP18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 MGMTP16455 207 aa18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 ILF3Q12906 894 aaKnown RBP eCLIP18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 THAP6Q8TBB0 222 aa18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 BARX1Q9HBU1 254 aaPredicted RBP18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 C17orf51A8MQB3 221 aa18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 AGPAT2O15120 278 aa18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 AQP8O94778 261 aa18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 GP1BAP07359 652 aa18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 CSF1P09603 554 aa18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 GPR85P60893 370 aa18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 SGCGQ13326 291 aa18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 PRAMEF17Q5VTA0 474 aa18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 SLC39A5Q6ZMH5 540 aa18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 MDGA2Q7Z553 956 aa18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 ZNF296Q8WUU4 475 aaPredicted RBP18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 FAM3DQ96BQ1 224 aa18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 PRR13Q9NZ81 148 aa18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 C11orf98E9PRG8 122 aa18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 OR2T1O43869 369 aa18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 CD34P28906 385 aa18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 PSMD4P55036 377 aaKnown RBP18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 DHRS2Q13268 280 aa18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 PLEKHN1Q494U1 663 aaPredicted RBP18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 OR2G2Q8NGZ5 317 aa18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 FAM174AQ8TBP5 190 aa18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 TSACCQ96A04 125 aaPredicted RBP18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 KLHDC3Q9BQ90 382 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms