RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 TMEM123Q8N131 208 aa11.38□□□□□ -0.59
CLK3-214ENST00000564096 STX19Q8N4C7 294 aa11.38□□□□□ -0.59
CLK3-214ENST00000564096 SYT14Q8NB59 555 aa11.38□□□□□ -0.59
CLK3-214ENST00000564096 BBS1Q8NFJ9 593 aa11.38□□□□□ -0.59
CLK3-214ENST00000564096 MBD3L2Q8NHZ7 208 aaPredicted RBP11.38□□□□□ -0.59
CLK3-214ENST00000564096 RNFT2Q96EX2 444 aa11.38□□□□□ -0.59
CLK3-214ENST00000564096 MYCBPQ99417 103 aaPredicted RBP11.38□□□□□ -0.59
CLK3-214ENST00000564096 CNN2Q99439 309 aaKnown RBP11.38□□□□□ -0.59
CLK3-214ENST00000564096 COPS4Q9BT78 406 aa11.38□□□□□ -0.59
CLK3-214ENST00000564096 MRPL13Q9BYD1 178 aaKnown RBP11.38□□□□□ -0.59
CLK3-214ENST00000564096 SLCO5A1Q9H2Y9 848 aa11.38□□□□□ -0.59
CLK3-214ENST00000564096 RERGLQ9H628 205 aa11.38□□□□□ -0.59
CLK3-214ENST00000564096 MED20Q9H944 212 aa11.38□□□□□ -0.59
CLK3-214ENST00000564096 VCX3AQ9NNX9 186 aa11.38□□□□□ -0.59
CLK3-214ENST00000564096 GLTPQ9NZD2 209 aa11.38□□□□□ -0.59
CLK3-214ENST00000564096 AASSQ9UDR5 926 aa11.38□□□□□ -0.59
CLK3-214ENST00000564096 PCDHGB1Q9Y5G3 927 aa11.38□□□□□ -0.59
CLK3-214ENST00000564096 SNX5Q9Y5X3 404 aa11.38□□□□□ -0.59
CLK3-214ENST00000564096 ACACBO00763 2458 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 RGS10O43665 173 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 XPNPEP2O43895 674 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 ZNF432O94892 652 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 HLA-DQA2P01906 255 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 GYPBP06028 91 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 CRHP06850 196 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 LYNP07948 512 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 RPSAP08865 295 aaKnown RBP11.37□□□□□ -0.59
CLK3-214ENST00000564096 MYL12AP19105 171 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 GUCA1AP43080 201 aaPredicted RBP11.37□□□□□ -0.59
CLK3-214ENST00000564096 SELENOPP49908 381 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 ZNF84P51523 738 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 ACTC1P68032 377 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 ACTA1P68133 377 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 RUNX1T1Q06455 604 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 GGTLC2Q14390 218 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 RIPPLY2Q5TAB7 128 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 PCSK4Q6UW60 755 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 NHLRC1Q6VVB1 395 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 RPTNQ6XPR3 784 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 BCDIN3DQ7Z5W3 292 aaKnown RBP11.37□□□□□ -0.59
CLK3-214ENST00000564096 ZBTB46Q86UZ6 589 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 C20orf196Q8IYI0 205 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 ZNF100Q8IYN0 542 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 ZIC4Q8N9L1 334 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 TMEM54Q969K7 222 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 DDOQ99489 341 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 HCAR1Q9BXC0 346 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 LINC00470Q9BZP3 86 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 NUAK2Q9H093 628 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 HAO2Q9NYQ3 351 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 PSORS1C1Q9UIG5 152 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 ING1Q9UK53 422 aaPredicted RBP11.37□□□□□ -0.59
CLK3-214ENST00000564096 CLEC4AQ9UMR7 237 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 PCDHGB5Q9Y5G0 923 aa11.37□□□□□ -0.59
CLK3-214ENST00000564096 BAHCC1Q9P281 2608 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 A0A087WXM4 84 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 CCDC182A6NF36 153 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 ZNF587BE7ETH6 402 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 WISP2O76076 250 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 RAB36O95755 333 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 IL2RAP01589 272 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 CLUP10909 449 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 CTLA4P16410 223 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 GSTT1P30711 240 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 SLC35A2P78381 396 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 FMODQ06828 376 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 STK11Q15831 433 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 C10orf128Q5T292 105 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 LAIR2Q6ISS4 152 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 ZNF773Q6PK81 442 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 FAM214BQ7L5A3 538 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 GLB1L2Q8IW92 636 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 OR6V1Q8N148 313 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 SVOPQ8N4V2 548 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 C9orf106Q8NAJ2 232 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 TSPAN14Q8NG11 270 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 OR10H5Q8NGA6 315 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 OR51G2Q8NGK0 314 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 OR6K3Q8NGY3 331 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 PTP4A1Q93096 173 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 KISS1RQ969F8 398 aaPredicted RBP11.36□□□□□ -0.59
CLK3-214ENST00000564096 MCHR2Q969V1 340 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 MRPL48Q96GC5 212 aaKnown RBP11.36□□□□□ -0.59
CLK3-214ENST00000564096 ALKBH3Q96Q83 286 aaPredicted RBP11.36□□□□□ -0.59
CLK3-214ENST00000564096 CCDC90BQ9GZT6 254 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 SRA1Q9HD15 236 aaKnown RBP11.36□□□□□ -0.59
CLK3-214ENST00000564096 AMBNQ9NP70 447 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 INPP5EQ9NRR6 644 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 CHCHD3Q9NX63 227 aaKnown RBP11.36□□□□□ -0.59
CLK3-214ENST00000564096 UPB1Q9UBR1 384 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 SCOCQ9UIL1 159 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 FOXD3Q9UJU5 478 aaPredicted RBP11.36□□□□□ -0.59
CLK3-214ENST00000564096 B9D1Q9UPM9 204 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 ZNF835Q9Y2P0 537 aa11.36□□□□□ -0.59
CLK3-214ENST00000564096 MGAQ8IWI9 3026 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 PKD1L2Q7Z442 2459 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 IGLV1-36A0A0B4J1U3 117 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 A0A1W2PPL8 197 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 PTGES3LE9PB15 166 aa11.35□□□□□ -0.59
CLK3-214ENST00000564096 ZNHIT1O43257 154 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms