RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 KLF3P57682 345 aaPredicted RBP8.73□□□□□ -1.01
SF3B3-204ENST00000563739 GUCY1A3Q02108 690 aa8.73□□□□□ -1.01
SF3B3-204ENST00000563739 ZNF154Q13106 437 aa8.73□□□□□ -1.01
SF3B3-204ENST00000563739 SMU1Q2TAY7 513 aa8.73□□□□□ -1.01
SF3B3-204ENST00000563739 LIN52Q52LA3 116 aa8.73□□□□□ -1.01
SF3B3-204ENST00000563739 ZNF101Q8IZC7 436 aa8.73□□□□□ -1.01
SF3B3-204ENST00000563739 LRRC8CQ8TDW0 803 aa8.73□□□□□ -1.01
SF3B3-204ENST00000563739 DYDC1Q8WWB3 177 aa8.73□□□□□ -1.01
SF3B3-204ENST00000563739 VPS33AQ96AX1 596 aa8.73□□□□□ -1.01
SF3B3-204ENST00000563739 PPP1R36Q96LQ0 422 aa8.73□□□□□ -1.01
SF3B3-204ENST00000563739 PRDM13Q9H4Q3 707 aa8.73□□□□□ -1.01
SF3B3-204ENST00000563739 INTS9Q9NV88 658 aaKnown RBP8.73□□□□□ -1.01
SF3B3-204ENST00000563739 PNPOQ9NVS9 261 aa8.73□□□□□ -1.01
SF3B3-204ENST00000563739 INSIG2Q9Y5U4 225 aa8.73□□□□□ -1.01
SF3B3-204ENST00000563739 A0A087WUJ7 227 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 A0A1B0GWA3 101 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 CCDC154A6NI56 674 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 TPST2O60704 377 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 SNAP29O95721 258 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 IGHV3-13P01766 116 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 IGHMP01871 453 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 BCHEP06276 602 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 ADH4P08319 380 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 MMP7P09237 267 aaPredicted RBP8.72□□□□□ -1.01
SF3B3-204ENST00000563739 OR8G3PP0DMU2 310 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 HOXB9P17482 250 aaPredicted RBP8.72□□□□□ -1.01
SF3B3-204ENST00000563739 LSP1P33241 339 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 CD80P33681 288 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 CHI3L1P36222 383 aaPredicted RBP8.72□□□□□ -1.01
SF3B3-204ENST00000563739 WNT5AP41221 380 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 CAMK2DQ13557 499 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 TSTQ16762 297 aaKnown RBP8.72□□□□□ -1.01
SF3B3-204ENST00000563739 PCGF3Q3KNV8 242 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 MMEL1Q495T6 779 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 ARMCX4Q5H9R4 360 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 FAM69AQ5T7M9 428 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 GKAP1Q5VSY0 366 aaPredicted RBP8.72□□□□□ -1.01
SF3B3-204ENST00000563739 Q6ZPA2 131 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 H1FNTQ75WM6 255 aaPredicted RBP8.72□□□□□ -1.01
SF3B3-204ENST00000563739 LRRC34Q8IZ02 419 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 C10orf111Q8N326 155 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 KIR3DL3Q8N743 410 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 SYNPRQ8TBG9 265 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 SLC38A5Q8WUX1 472 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 IPCEF1Q8WWN9 437 aaPredicted RBP8.72□□□□□ -1.01
SF3B3-204ENST00000563739 GEMIN6Q8WXD5 167 aaKnown RBP8.72□□□□□ -1.01
SF3B3-204ENST00000563739 TMEM54Q969K7 222 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 TMEM19Q96HH6 336 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 SIGLEC11Q96RL6 698 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 SH3GL3Q99963 347 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 GAL3ST1Q99999 423 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 RBM4BQ9BQ04 359 aaKnown RBP8.72□□□□□ -1.01
SF3B3-204ENST00000563739 SPATA9Q9BWV2 254 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 KRTAP3-3Q9BYR6 98 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 KRTAP3-2Q9BYR7 98 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 ULBP2Q9BZM5 246 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 DPY30Q9C005 99 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 MMP27Q9H306 513 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 DENND2DQ9H6A0 471 aaPredicted RBP8.72□□□□□ -1.01
SF3B3-204ENST00000563739 SAP30LQ9HAJ7 183 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 C1RLQ9NZP8 487 aa8.72□□□□□ -1.01
SF3B3-204ENST00000563739 PLXNB1O43157 2135 aa8.71□□□□□ -1.01
SF3B3-204ENST00000563739 SACSQ9NZJ4 4579 aa8.71□□□□□ -1.01
SF3B3-204ENST00000563739 E9PBE3 544 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 HDAC3O15379 428 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 UBL3O95164 117 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 RAB36O95755 333 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 GPANK1O95872 356 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 NR2F1P10589 423 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 UQCRBP14927 111 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 ATP4BP51164 291 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 UFM1P61960 85 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 PAX8Q06710 450 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 FBLN7Q53RD9 439 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 ANXA8L1Q5VT79 327 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 ZNF774Q6NX45 483 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 TMEM154Q6P9G4 183 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 LRFN4Q6PJG9 635 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 SPATC1Q76KD6 591 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 PEX5LQ8IYB4 626 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 SLC22A24Q8N4F4 322 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 GLB1L3Q8NCI6 653 aaPredicted RBP8.71□□□□□ -1.02
SF3B3-204ENST00000563739 SLC30A7Q8NEW0 376 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 ZNF519Q8TB69 540 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 MAGEB18Q96M61 343 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 C7orf26Q96N11 449 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 NUF2Q9BZD4 464 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 MEAF6Q9HAF1 191 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 PATZ1Q9HBE1 687 aaKnown RBP8.71□□□□□ -1.02
SF3B3-204ENST00000563739 PRDM4Q9UKN5 801 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 NOX1Q9Y5S8 564 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 AUP1Q9Y679 476 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 DOCK11Q5JSL3 2073 aa8.71□□□□□ -1.02
SF3B3-204ENST00000563739 TRAV36DV7A0A075B6V5 113 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 GMNCA6NCL1 334 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 FAM181BA6NEQ2 426 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 ERICH4A6NGS2 130 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 H0YL77 283 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 SDHDO14521 159 aa8.7□□□□□ -1.02
SF3B3-204ENST00000563739 HOXA3O43365 443 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 694 ms