RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 RBBP4Q09028 425 aa14.29□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 CYP51A1Q16850 503 aa14.29□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 AGBL2Q5U5Z8 902 aa14.29□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 TTC33Q6PID6 262 aaPredicted RBP14.29□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 DHDDSQ86SQ9 333 aa14.29□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 RETREG3Q86VR2 466 aa14.29□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.29□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 SLC30A7Q8NEW0 376 aa14.29□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 VANGL1Q8TAA9 524 aaPredicted RBP14.29□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 TMEM186Q96B77 213 aa14.29□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 TSPAN32Q96QS1 320 aa14.29□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 ZNF426Q9BUY5 554 aa14.29□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 ZNF385DQ9H6B1 395 aa14.29□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 METTL17Q9H7H0 456 aaPredicted RBP14.29□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 LPAR2Q9HBW0 351 aa14.29□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 NANSQ9NR45 359 aa14.29□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 TREM2Q9NZC2 230 aa14.29□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 METRNQ9UJH8 293 aa14.29□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 SLC7A7Q9UM01 511 aa14.29□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 DHHO43323 396 aa14.28□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 VENTXO95231 258 aa14.28□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 TFP02787 698 aa14.28□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 ASAH2BP0C7U1 165 aa14.28□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 GAAP10253 952 aa14.28□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 CD247P20963 164 aa14.28□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 LSP1P33241 339 aa14.28□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 TMEM33P57088 247 aa14.28□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 ERVS71-1P61550 626 aa14.28□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 LMO4P61968 165 aa14.28□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 REP15Q6BDI9 236 aa14.28□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 RGS7BPQ6MZT1 257 aaPredicted RBP14.28□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 DEF8Q6ZN54 512 aa14.28□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 DPP10Q8N608 796 aa14.28□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 SEMA6DQ8NFY4 1073 aa14.28□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 OR4K5Q8NGD3 323 aa14.28□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 TAMM41Q96BW9 452 aa14.28□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 PCDHAC1Q9H158 963 aa14.28□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 OR51B6Q9H340 312 aa14.28□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 LEF1Q9UJU2 399 aaPredicted RBP14.28□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 ZNF229Q9UJW7 825 aa14.28□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 ZNF346Q9UL40 294 aaKnown RBP14.28□□□□□ -0.12
VPS9D1-AS1-201ENST00000562298 IGLV3-9A0A075B6K5 115 aa14.27□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 TRAPPC13A5PLN9 417 aa14.27□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 PPIHO43447 177 aaKnown RBP14.27□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 QDPRP09417 244 aa14.27□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 CRYBA2P53672 197 aa14.27□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 RUNX1T1Q06455 604 aa14.27□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 HIST3H3Q16695 136 aa14.27□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 NKPD1Q17RQ9 610 aa14.27□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 LRRC37BQ96QE4 947 aa14.27□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 CGREF1Q99674 301 aa14.27□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 PRSS27Q9BQR3 290 aa14.27□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 SLC19A3Q9BZV2 496 aa14.27□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 RABEP2Q9H5N1 569 aa14.27□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 OCEL1Q9H607 264 aa14.27□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 KAT8Q9H7Z6 458 aaKnown RBP14.27□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 MEPEQ9NQ76 525 aaPredicted RBP14.27□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 TAAR3PQ9P1P4 343 aa14.27□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 NDUFAF1Q9Y375 327 aa14.27□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 SLC22A23A1A5C7 686 aa14.26□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 C17orf100A8MU93 164 aa14.26□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 FARS2O95363 451 aaKnown RBP14.26□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 SNAP29O95721 258 aa14.26□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 UMPSP11172 480 aa14.26□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 ZNF250P15622 560 aa14.26□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 KLF3P57682 345 aaPredicted RBP14.26□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 CCL8P80075 99 aa14.26□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 PATL1Q86TB9 770 aaKnown RBP14.26□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 MCHR2Q969V1 340 aa14.26□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 MPP4Q96JB8 637 aa14.26□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 ZNF347Q96SE7 839 aa14.26□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 SEPHS2Q99611 448 aa14.26□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 ZNF416Q9BWM5 594 aa14.26□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 MRPL13Q9BYD1 178 aaKnown RBP14.26□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 RNF121Q9H920 327 aa14.26□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 HINT3Q9NQE9 182 aaKnown RBP14.26□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 TRIM33Q9UPN9 1127 aa14.26□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 GRIP1Q9Y3R0 1128 aa14.26□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 ANGPT2O15123 496 aa14.25□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 CDC14BO60729 498 aa14.25□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 ENTPD5O75356 428 aa14.25□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 BCL10O95999 233 aa14.25□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 IGHG1P01857 330 aa14.25□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 MMP7P09237 267 aaPredicted RBP14.25□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 PCGF2P35227 344 aa14.25□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 CLRN1P58418 232 aa14.25□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 MYBPC1Q00872 1141 aa14.25□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 RPL18Q07020 188 aaKnown RBP14.25□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 TBC1D28Q2M2D7 210 aa14.25□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 SLC36A2Q495M3 483 aa14.25□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 NRN1LQ496H8 165 aa14.25□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 TMEM53Q6P2H8 277 aa14.25□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 SLC16A14Q7RTX9 510 aa14.25□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 NANOGNBQ7Z5D8 188 aa14.25□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 NOXO1Q8NFA2 376 aa14.25□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 OR51F2Q8NH61 342 aa14.25□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 ZNF519Q8TB69 540 aa14.25□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 SYNPRQ8TBG9 265 aa14.25□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 GTF3AQ92664 365 aaKnown RBP14.25□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 THOC1Q96FV9 657 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms