RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 SKA3Q8IX90 412 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 OR9Q2Q8NGE9 314 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 CANT1Q8WVQ1 401 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 NINJ1Q92982 152 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 MCUR1Q96AQ8 359 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 MBD6Q96DN6 1003 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 RSRC1Q96IZ7 334 aaKnown RBP12.1□□□□□ -0.47
TPM1-230ENST00000561266 Q96M85 177 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 FOXB1Q99853 325 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 KATNB1Q9BVA0 655 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 NGBQ9NPG2 151 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 CRNNQ9UBG3 495 aaPredicted RBP12.1□□□□□ -0.47
TPM1-230ENST00000561266 POMPQ9Y244 141 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 UGT2A1Q9Y4X1 527 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 ARFGEF3Q5TH69 2177 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 ITPR3Q14573 2671 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 MED13LQ71F56 2210 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 HIVEP1P15822 2718 aa12.1□□□□□ -0.47
TPM1-230ENST00000561266 UNC119BA6NIH7 251 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 NPIPB13A6NJU9 1138 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 NPIPB4C9JG80 1138 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 ATP6V1G2-DDX39BF2Z307 99 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 IGHG1P01857 330 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 SCG5P05408 212 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 CECR9P0C854 216 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 CDAP32320 146 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 GSSP48637 474 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 ZNF133P52736 654 aaPredicted RBP12.09□□□□□ -0.47
TPM1-230ENST00000561266 SH3BGRP55822 239 aaPredicted RBP12.09□□□□□ -0.47
TPM1-230ENST00000561266 CLRN1P58418 232 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 PIGFQ07326 219 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 DNAL1Q4LDG9 190 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 MESTQ5EB52 335 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 PGBD2Q6P3X8 592 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 SLC25A47Q6Q0C1 308 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 RRM2BQ7LG56 351 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 TMEM179BQ7Z7N9 219 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 LURAP1LQ8IV03 231 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 CDK20Q8IZL9 346 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 ZNF611Q8N823 705 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 SLCO4A1Q96BD0 722 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 RASD2Q96D21 266 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 MS4A3Q96HJ5 214 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 SLC38A2Q96QD8 506 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 SH3GL3Q99963 347 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 CXXC4Q9H2H0 198 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 MAGIXQ9H6Y5 334 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 B3GAT2Q9NPZ5 323 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 TMEM38BQ9NVV0 291 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 SLC7A8Q9UHI5 535 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 MOKQ9UQ07 419 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 TMEM5Q9Y2B1 443 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 POFUT2Q9Y2G5 429 aa12.09□□□□□ -0.47
TPM1-230ENST00000561266 F8P00451 2351 aa12.08□□□□□ -0.47
TPM1-230ENST00000561266 WNT11O96014 354 aa12.08□□□□□ -0.48
TPM1-230ENST00000561266 IGKV3-15P01624 115 aa12.08□□□□□ -0.48
TPM1-230ENST00000561266 IGFBP1P08833 259 aaPredicted RBP12.08□□□□□ -0.48
TPM1-230ENST00000561266 HOXB1P14653 301 aaPredicted RBP12.08□□□□□ -0.48
TPM1-230ENST00000561266 CBR1P16152 277 aa12.08□□□□□ -0.48
TPM1-230ENST00000561266 PTAFRP25105 342 aa12.08□□□□□ -0.48
TPM1-230ENST00000561266 DAP3P51398 398 aaKnown RBP12.08□□□□□ -0.48
TPM1-230ENST00000561266 CDH11P55287 796 aa12.08□□□□□ -0.48
TPM1-230ENST00000561266 UBE2NP61088 152 aaKnown RBP12.08□□□□□ -0.48
TPM1-230ENST00000561266 CHRNB3Q05901 458 aa12.08□□□□□ -0.48
TPM1-230ENST00000561266 ETFDHQ16134 617 aa12.08□□□□□ -0.48
TPM1-230ENST00000561266 C1orf94Q6P1W5 598 aa12.08□□□□□ -0.48
TPM1-230ENST00000561266 TMEM108Q6UXF1 575 aa12.08□□□□□ -0.48
TPM1-230ENST00000561266 FOXC2Q99958 501 aa12.08□□□□□ -0.48
TPM1-230ENST00000561266 CHID1Q9BWS9 393 aa12.08□□□□□ -0.48
TPM1-230ENST00000561266 OBP2BQ9NPH6 170 aa12.08□□□□□ -0.48
TPM1-230ENST00000561266 CISD1Q9NZ45 108 aaKnown RBP12.08□□□□□ -0.48
TPM1-230ENST00000561266 U3KQV3 271 aa12.08□□□□□ -0.48
TPM1-230ENST00000561266 TCRBV3S1A0A5B6 114 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 AQP12BA6NM10 295 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 TNFRSF11BO00300 401 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 OR10H3O60404 316 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 NDUFB2O95178 105 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 GASTP01350 101 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 CD14P08571 375 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 CD79AP11912 226 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 HOXC12P31275 282 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 RPL4P36578 427 aaKnown RBP12.07□□□□□ -0.48
TPM1-230ENST00000561266 IDH3GP51553 393 aaPredicted RBP12.07□□□□□ -0.48
TPM1-230ENST00000561266 SMIM11AP58511 58 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 NAAAQ02083 359 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 HGFACQ04756 655 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 ANKDD1AQ495B1 522 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 C10orf128Q5T292 105 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 OTPQ5XKR4 325 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 OR2T5Q6IEZ7 315 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 SLC22A25Q6T423 547 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 KLHL17Q6TDP4 642 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 C20orf204Q6ZNR8 217 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 PTCHD4Q6ZW05 846 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 ZNF584Q8IVC4 421 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 AQP12AQ8IXF9 295 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 SLC22A24Q8N4F4 322 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 ARIH2OSQ8N7S6 290 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 OR2T29Q8NH02 315 aa12.07□□□□□ -0.48
TPM1-230ENST00000561266 SMAP2Q8WU79 429 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms