RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 CRLF1O75462 422 aa13.83□□□□□ -0.2
LMX1B-204ENST00000561065 FARS2O95363 451 aaKnown RBP13.83□□□□□ -0.2
LMX1B-204ENST00000561065 STAMBPO95630 424 aa13.83□□□□□ -0.2
LMX1B-204ENST00000561065 B4GALT1P15291 398 aa13.83□□□□□ -0.2
LMX1B-204ENST00000561065 RHCEP18577 417 aa13.83□□□□□ -0.2
LMX1B-204ENST00000561065 ARR3P36575 388 aa13.83□□□□□ -0.2
LMX1B-204ENST00000561065 GUCA1AP43080 201 aaPredicted RBP13.83□□□□□ -0.2
LMX1B-204ENST00000561065 CAPZA2P47755 286 aa13.83□□□□□ -0.2
LMX1B-204ENST00000561065 EFNA4P52798 201 aa13.83□□□□□ -0.2
LMX1B-204ENST00000561065 BIDP55957 195 aa13.83□□□□□ -0.2
LMX1B-204ENST00000561065 CHRNB3Q05901 458 aa13.83□□□□□ -0.2
LMX1B-204ENST00000561065 NPRL3Q12980 569 aa13.83□□□□□ -0.2
LMX1B-204ENST00000561065 SLC46A3Q7Z3Q1 461 aa13.83□□□□□ -0.2
LMX1B-204ENST00000561065 PIWIL3Q7Z3Z3 882 aaKnown RBP13.83□□□□□ -0.2
LMX1B-204ENST00000561065 VTCN1Q7Z7D3 282 aa13.83□□□□□ -0.2
LMX1B-204ENST00000561065 DPPA2Q7Z7J5 298 aa13.83□□□□□ -0.2
LMX1B-204ENST00000561065 NKAIN4Q8IVV8 208 aa13.83□□□□□ -0.2
LMX1B-204ENST00000561065 C10orf105Q8TEF2 133 aa13.83□□□□□ -0.2
LMX1B-204ENST00000561065 TMEM255BQ8WV15 326 aa13.83□□□□□ -0.2
LMX1B-204ENST00000561065 ACOT11Q8WXI4 607 aaPredicted RBP13.83□□□□□ -0.2
LMX1B-204ENST00000561065 BPIFA2Q96DR5 249 aa13.83□□□□□ -0.2
LMX1B-204ENST00000561065 HSH2DQ96JZ2 352 aa13.83□□□□□ -0.2
LMX1B-204ENST00000561065 ZNF75AQ96N20 296 aa13.83□□□□□ -0.2
LMX1B-204ENST00000561065 CDRT15Q96T59 188 aa13.83□□□□□ -0.2
LMX1B-204ENST00000561065 MEPEQ9NQ76 525 aaPredicted RBP13.83□□□□□ -0.2
LMX1B-204ENST00000561065 INIPQ9NRY2 104 aa13.83□□□□□ -0.2
LMX1B-204ENST00000561065 DCAF13Q9NV06 445 aaKnown RBP13.83□□□□□ -0.2
LMX1B-204ENST00000561065 B3GNT2Q9NY97 397 aa13.83□□□□□ -0.2
LMX1B-204ENST00000561065 TAS2R5Q9NYW4 299 aa13.83□□□□□ -0.2
LMX1B-204ENST00000561065 A4GNTQ9UNA3 340 aa13.83□□□□□ -0.2
LMX1B-204ENST00000561065 TMEM5Q9Y2B1 443 aa13.83□□□□□ -0.2
LMX1B-204ENST00000561065 ENPP4Q9Y6X5 453 aa13.83□□□□□ -0.2
LMX1B-204ENST00000561065 IGHG1P01857 330 aa13.82□□□□□ -0.2
LMX1B-204ENST00000561065 HLA-HP01893 362 aa13.82□□□□□ -0.2
LMX1B-204ENST00000561065 IGFBP1P08833 259 aaPredicted RBP13.82□□□□□ -0.2
LMX1B-204ENST00000561065 OR4A8P0C604 315 aa13.82□□□□□ -0.2
LMX1B-204ENST00000561065 SAGP10523 405 aaPredicted RBP13.82□□□□□ -0.2
LMX1B-204ENST00000561065 IFI30P13284 250 aa13.82□□□□□ -0.2
LMX1B-204ENST00000561065 SLC9A3P48764 834 aa13.82□□□□□ -0.2
LMX1B-204ENST00000561065 CLRN1P58418 232 aa13.82□□□□□ -0.2
LMX1B-204ENST00000561065 MELKQ14680 651 aa13.82□□□□□ -0.2
LMX1B-204ENST00000561065 MSMPQ1L6U9 139 aa13.82□□□□□ -0.2
LMX1B-204ENST00000561065 TMEM249Q2WGJ8 235 aa13.82□□□□□ -0.2
LMX1B-204ENST00000561065 ZNF730Q6ZMV8 503 aa13.82□□□□□ -0.2
LMX1B-204ENST00000561065 ZNF627Q7L945 461 aa13.82□□□□□ -0.2
LMX1B-204ENST00000561065 NUP37Q8NFH4 326 aa13.82□□□□□ -0.2
LMX1B-204ENST00000561065 OR4F15Q8NGB8 312 aa13.82□□□□□ -0.2
LMX1B-204ENST00000561065 FAM168AQ92567 244 aa13.82□□□□□ -0.2
LMX1B-204ENST00000561065 MS4A3Q96HJ5 214 aa13.82□□□□□ -0.2
LMX1B-204ENST00000561065 NSMCE2Q96MF7 247 aa13.82□□□□□ -0.2
LMX1B-204ENST00000561065 GLTPQ9NZD2 209 aa13.82□□□□□ -0.2
LMX1B-204ENST00000561065 GMPR2Q9P2T1 348 aaKnown RBP13.82□□□□□ -0.2
LMX1B-204ENST00000561065 EGFL7Q9UHF1 273 aa13.82□□□□□ -0.2
LMX1B-204ENST00000561065 SPEF1Q9Y4P9 236 aa13.82□□□□□ -0.2
LMX1B-204ENST00000561065 PMF1-BGLAPU3KQ54 211 aa13.82□□□□□ -0.2
LMX1B-204ENST00000561065 MALRD1Q5VYJ5 2156 aa13.81□□□□□ -0.2
LMX1B-204ENST00000561065 NPIPB13A6NJU9 1138 aa13.81□□□□□ -0.2
LMX1B-204ENST00000561065 B2RBV5 119 aa13.81□□□□□ -0.2
LMX1B-204ENST00000561065 NPIPB4C9JG80 1138 aa13.81□□□□□ -0.2
LMX1B-204ENST00000561065 PDE5AO76074 875 aa13.81□□□□□ -0.2
LMX1B-204ENST00000561065 NCK1P16333 377 aa13.81□□□□□ -0.2
LMX1B-204ENST00000561065 CALB2P22676 271 aa13.81□□□□□ -0.2
LMX1B-204ENST00000561065 THBS4P35443 961 aa13.81□□□□□ -0.2
LMX1B-204ENST00000561065 SERPINF1P36955 418 aa13.81□□□□□ -0.2
LMX1B-204ENST00000561065 ZNF84P51523 738 aa13.81□□□□□ -0.2
LMX1B-204ENST00000561065 UGT2B15P54855 530 aa13.81□□□□□ -0.2
LMX1B-204ENST00000561065 SNRPD2P62316 118 aaKnown RBP13.81□□□□□ -0.2
LMX1B-204ENST00000561065 LOXL1Q08397 574 aaPredicted RBP13.81□□□□□ -0.2
LMX1B-204ENST00000561065 EFNB3Q15768 340 aa13.81□□□□□ -0.2
LMX1B-204ENST00000561065 ZNF813Q6ZN06 617 aa13.81□□□□□ -0.2
LMX1B-204ENST00000561065 OAFQ86UD1 273 aa13.81□□□□□ -0.2
LMX1B-204ENST00000561065 DEFB107AQ8IZN7 70 aa13.81□□□□□ -0.2
LMX1B-204ENST00000561065 PFN4Q8NHR9 129 aa13.81□□□□□ -0.2
LMX1B-204ENST00000561065 PYURFQ96I23 114 aa13.81□□□□□ -0.2
LMX1B-204ENST00000561065 RBP7Q96R05 134 aa13.81□□□□□ -0.2
LMX1B-204ENST00000561065 FOXB1Q99853 325 aa13.81□□□□□ -0.2
LMX1B-204ENST00000561065 KCNN2Q9H2S1 579 aa13.81□□□□□ -0.2
LMX1B-204ENST00000561065 PLK3Q9H4B4 646 aa13.81□□□□□ -0.2
LMX1B-204ENST00000561065 ZNF442Q9H7R0 627 aa13.81□□□□□ -0.2
LMX1B-204ENST00000561065 NMNAT1Q9HAN9 279 aaPredicted RBP13.81□□□□□ -0.2
LMX1B-204ENST00000561065 ARL8BQ9NVJ2 186 aa13.81□□□□□ -0.2
LMX1B-204ENST00000561065 SNX13Q9Y5W8 968 aa13.81□□□□□ -0.2
LMX1B-204ENST00000561065 EFCAB9A8MZ26 197 aa13.8□□□□□ -0.2
LMX1B-204ENST00000561065 VWC2LB2RUY7 222 aa13.8□□□□□ -0.2
LMX1B-204ENST00000561065 F12P00748 615 aaPredicted RBP13.8□□□□□ -0.2
LMX1B-204ENST00000561065 H1F0P07305 194 aaKnown RBP13.8□□□□□ -0.2
LMX1B-204ENST00000561065 SLC25A16P16260 332 aa13.8□□□□□ -0.2
LMX1B-204ENST00000561065 ZNF14P17017 642 aaPredicted RBP13.8□□□□□ -0.2
LMX1B-204ENST00000561065 TCN1P20061 433 aaPredicted RBP13.8□□□□□ -0.2
LMX1B-204ENST00000561065 YAP1P46937 504 aaKnown RBP13.8□□□□□ -0.2
LMX1B-204ENST00000561065 DSCR9P59020 149 aa13.8□□□□□ -0.2
LMX1B-204ENST00000561065 PRKCDQ05655 676 aa13.8□□□□□ -0.2
LMX1B-204ENST00000561065 RPL18Q07020 188 aaKnown RBP13.8□□□□□ -0.2
LMX1B-204ENST00000561065 ALG10Q5BKT4 473 aa13.8□□□□□ -0.2
LMX1B-204ENST00000561065 C6orf52Q5T4I8 152 aa13.8□□□□□ -0.2
LMX1B-204ENST00000561065 FAM205BPQ63HN1 556 aa13.8□□□□□ -0.2
LMX1B-204ENST00000561065 MBOAT2Q6ZWT7 520 aa13.8□□□□□ -0.2
LMX1B-204ENST00000561065 FGFBP3Q8TAT2 258 aa13.8□□□□□ -0.2
LMX1B-204ENST00000561065 TMEM54Q969K7 222 aa13.8□□□□□ -0.2
LMX1B-204ENST00000561065 TNFRSF13CQ96RJ3 184 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms