RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 SRA1Q9HD15 236 aaKnown RBP14.99□□□□□ -0.01
TPM1-228ENST00000560975 MYO7AQ13402 2215 aa14.99□□□□□ -0.01
TPM1-228ENST00000560975 TRBV23-1A0A0A0MS06 115 aa14.99□□□□□ -0.01
TPM1-228ENST00000560975 S100A9P06702 114 aaKnown RBP14.99□□□□□ -0.01
TPM1-228ENST00000560975 ITGA5P08648 1049 aa14.99□□□□□ -0.01
TPM1-228ENST00000560975 AVPR2P30518 371 aa14.99□□□□□ -0.01
TPM1-228ENST00000560975 PRKXP51817 358 aa14.99□□□□□ -0.01
TPM1-228ENST00000560975 INPP5JQ15735 1006 aaPredicted RBP14.99□□□□□ -0.01
TPM1-228ENST00000560975 FAM109BQ6ICB4 259 aaPredicted RBP14.99□□□□□ -0.01
TPM1-228ENST00000560975 TMEM205Q6UW68 189 aa14.99□□□□□ -0.01
TPM1-228ENST00000560975 OR10R2Q8NGX6 335 aa14.99□□□□□ -0.01
TPM1-228ENST00000560975 TMED6Q8WW62 240 aa14.99□□□□□ -0.01
TPM1-228ENST00000560975 ARL11Q969Q4 196 aa14.99□□□□□ -0.01
TPM1-228ENST00000560975 NXPE3Q969Y0 559 aa14.99□□□□□ -0.01
TPM1-228ENST00000560975 COX14Q96I36 57 aa14.99□□□□□ -0.01
TPM1-228ENST00000560975 ALX4Q9H161 411 aaPredicted RBP14.99□□□□□ -0.01
TPM1-228ENST00000560975 A0A1B0GTI1 187 aa14.99□□□□□ -0.01
TPM1-228ENST00000560975 GRXCR1A8MXD5 290 aa14.99□□□□□ -0.01
TPM1-228ENST00000560975 DCNP07585 359 aaKnown RBP14.99□□□□□ -0.01
TPM1-228ENST00000560975 TACSTD2P09758 323 aa14.99□□□□□ -0.01
TPM1-228ENST00000560975 LAG3P18627 525 aa14.99□□□□□ -0.01
TPM1-228ENST00000560975 PEBP1P30086 187 aaKnown RBP14.99□□□□□ -0.01
TPM1-228ENST00000560975 IRF4Q15306 451 aa14.99□□□□□ -0.01
TPM1-228ENST00000560975 TCEAL5Q5H9L2 206 aa14.99□□□□□ -0.01
TPM1-228ENST00000560975 KCTD9Q7L273 389 aa14.99□□□□□ -0.01
TPM1-228ENST00000560975 C12orf40Q86WS4 652 aa14.99□□□□□ -0.01
TPM1-228ENST00000560975 OR4A4PQ8NGN8 299 aa14.99□□□□□ -0.01
TPM1-228ENST00000560975 CASTOR1Q8WTX7 329 aa14.99□□□□□ -0.01
TPM1-228ENST00000560975 EPHA6Q9UF33 1036 aa14.99□□□□□ -0.01
TPM1-228ENST00000560975 TRPM6Q9BX84 2022 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 C5orf42Q9H799 3197 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 ICOSLGO75144 302 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 SLC25A4P12235 298 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 CPMP14384 443 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 CSRP1P21291 193 aaKnown RBP14.98□□□□□ -0.01
TPM1-228ENST00000560975 ZNF684Q5T5D7 378 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 C3orf33Q6P1S2 294 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 SLC39A5Q6ZMH5 540 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 CD163Q86VB7 1156 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 TSEN15Q8WW01 171 aaKnown RBP14.98□□□□□ -0.01
TPM1-228ENST00000560975 ASB13Q8WXK3 278 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 FAM3DQ96BQ1 224 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 MICU1Q9BPX6 476 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 SELENOIQ9C0D9 397 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 GTF2A1LQ9UNN4 478 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 EML5Q05BV3 1969 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 MKI67P46013 3256 aaKnown RBP14.98□□□□□ -0.01
TPM1-228ENST00000560975 A0A0B4J2A0 478 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 IGLON5A6NGN9 336 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 ELOA3DA6NLF2 546 aaPredicted RBP14.98□□□□□ -0.01
TPM1-228ENST00000560975 H7C1C5 153 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 GLCEO94923 617 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 PGAM2P15259 253 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 CDKN2AP42771 156 aaKnown RBP14.98□□□□□ -0.01
TPM1-228ENST00000560975 TAS2R19P59542 299 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 LCN6P62502 163 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 ELOA3BQ3SY89 546 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 LINC01590Q5TEZ4 76 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 KIRREL2Q6UWL6 708 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 RNF44Q7L0R7 432 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 BPIFB2Q8N4F0 458 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 PLPP7Q8NBV4 271 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 ELOA3Q8NG57 546 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 OR6S1Q8NH40 331 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 SHPKQ9UHJ6 478 aa14.98□□□□□ -0.01
TPM1-228ENST00000560975 CARHSP1Q9Y2V2 147 aaKnown RBP14.98□□□□□ -0.01
TPM1-228ENST00000560975 TRBV5-5A0A0J9YX44 114 aa14.97□□□□□ -0.01
TPM1-228ENST00000560975 BLOC1S5-TXNDC5H3BN57 136 aa14.97□□□□□ -0.01
TPM1-228ENST00000560975 SRPX2O60687 465 aaPredicted RBP14.97□□□□□ -0.01
TPM1-228ENST00000560975 PBX2P40425 430 aa14.97□□□□□ -0.01
TPM1-228ENST00000560975 AKR1C3P42330 323 aa14.97□□□□□ -0.01
TPM1-228ENST00000560975 HABP2Q14520 560 aaPredicted RBP14.97□□□□□ -0.01
TPM1-228ENST00000560975 ZNF813Q6ZN06 617 aa14.97□□□□□ -0.01
TPM1-228ENST00000560975 ERN2Q76MJ5 926 aaKnown RBP14.97□□□□□ -0.01
TPM1-228ENST00000560975 ANKRD33Q7Z3H0 272 aa14.97□□□□□ -0.01
TPM1-228ENST00000560975 OR4S1Q8NGB4 309 aa14.97□□□□□ -0.01
TPM1-228ENST00000560975 OR5AP2Q8NGF4 316 aa14.97□□□□□ -0.01
TPM1-228ENST00000560975 OR2L8Q8NGY9 312 aa14.97□□□□□ -0.01
TPM1-228ENST00000560975 GPX8Q8TED1 209 aa14.97□□□□□ -0.01
TPM1-228ENST00000560975 OR8D1Q8WZ84 308 aa14.97□□□□□ -0.01
TPM1-228ENST00000560975 BCL2L14Q9BZR8 327 aa14.97□□□□□ -0.01
TPM1-228ENST00000560975 UQCC1Q9NVA1 299 aa14.97□□□□□ -0.01
TPM1-228ENST00000560975 C19orf53Q9UNZ5 99 aaPredicted RBP14.97□□□□□ -0.01
TPM1-228ENST00000560975 CDC40O60508 579 aaKnown RBP eCLIP14.97□□□□□ -0.01
TPM1-228ENST00000560975 SKP1P63208 163 aa14.97□□□□□ -0.01
TPM1-228ENST00000560975 RUNX2Q13950 521 aa14.97□□□□□ -0.01
TPM1-228ENST00000560975 SMCO1Q147U7 214 aa14.97□□□□□ -0.01
TPM1-228ENST00000560975 ETV3LQ6ZN32 361 aa14.97□□□□□ -0.01
TPM1-228ENST00000560975 ZNF600Q6ZNG1 722 aa14.97□□□□□ -0.01
TPM1-228ENST00000560975 SFTPA1Q8IWL2 248 aa14.97□□□□□ -0.01
TPM1-228ENST00000560975 MFSD9Q8NBP5 474 aa14.97□□□□□ -0.01
TPM1-228ENST00000560975 DMBX1Q8NFW5 382 aa14.97□□□□□ -0.01
TPM1-228ENST00000560975 ZNF417Q8TAU3 575 aa14.97□□□□□ -0.01
TPM1-228ENST00000560975 SLC22A8Q8TCC7 542 aa14.97□□□□□ -0.01
TPM1-228ENST00000560975 SEH1LQ96EE3 360 aa14.97□□□□□ -0.01
TPM1-228ENST00000560975 HRH4Q9H3N8 390 aa14.97□□□□□ -0.01
TPM1-228ENST00000560975 RNF186Q9NXI6 227 aa14.97□□□□□ -0.01
TPM1-228ENST00000560975 C13orf42A0A1B0GVH6 325 aa14.96□□□□□ -0.01
TPM1-228ENST00000560975 GPANK1O95872 356 aa14.96□□□□□ -0.01
TPM1-228ENST00000560975 CCKBRP32239 447 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms