RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 C12orf10Q9HB07 376 aa14.03□□□□□ -0.16
HERC1-207ENST00000560316 CACYBPQ9HB71 228 aaKnown RBP14.03□□□□□ -0.16
HERC1-207ENST00000560316 NPHS2Q9NP85 383 aa14.03□□□□□ -0.16
HERC1-207ENST00000560316 DCAF16Q9NXF7 216 aa14.03□□□□□ -0.16
HERC1-207ENST00000560316 MDFIC2A0A1B0GVS7 189 aa14.02□□□□□ -0.17
HERC1-207ENST00000560316 IGHV3-13P01766 116 aa14.02□□□□□ -0.17
HERC1-207ENST00000560316 IGHMP01871 453 aa14.02□□□□□ -0.17
HERC1-207ENST00000560316 BGLAPP02818 100 aa14.02□□□□□ -0.17
HERC1-207ENST00000560316 IGHV4-38-2P0DP08 117 aa14.02□□□□□ -0.17
HERC1-207ENST00000560316 ZNF12P17014 697 aa14.02□□□□□ -0.17
HERC1-207ENST00000560316 AHCYP23526 432 aa14.02□□□□□ -0.17
HERC1-207ENST00000560316 BIDP55957 195 aa14.02□□□□□ -0.17
HERC1-207ENST00000560316 DSTNP60981 165 aa14.02□□□□□ -0.17
HERC1-207ENST00000560316 SEC61A1P61619 476 aaKnown RBP14.02□□□□□ -0.17
HERC1-207ENST00000560316 PUDPQ08623 228 aa14.02□□□□□ -0.17
HERC1-207ENST00000560316 MOGQ16653 247 aa14.02□□□□□ -0.17
HERC1-207ENST00000560316 SPRNQ5BIV9 151 aa14.02□□□□□ -0.17
HERC1-207ENST00000560316 TMEM255AQ5JRV8 349 aa14.02□□□□□ -0.17
HERC1-207ENST00000560316 FAM209AQ5JX71 171 aa14.02□□□□□ -0.17
HERC1-207ENST00000560316 BHLHE22Q8NFJ8 381 aaPredicted RBP14.02□□□□□ -0.17
HERC1-207ENST00000560316 MOGAT1Q96PD6 335 aa14.02□□□□□ -0.17
HERC1-207ENST00000560316 DCLRE1CQ96SD1 692 aaKnown RBP14.02□□□□□ -0.17
HERC1-207ENST00000560316 MRI1Q9BV20 369 aa14.02□□□□□ -0.17
HERC1-207ENST00000560316 BCL2L14Q9BZR8 327 aa14.02□□□□□ -0.17
HERC1-207ENST00000560316 TCF7L2Q9NQB0 619 aa14.02□□□□□ -0.17
HERC1-207ENST00000560316 TESQ9UGI8 421 aaKnown RBP14.02□□□□□ -0.17
HERC1-207ENST00000560316 IFT52Q9Y366 437 aa14.02□□□□□ -0.17
HERC1-207ENST00000560316 INSIG2Q9Y5U4 225 aa14.02□□□□□ -0.17
HERC1-207ENST00000560316 NBEAL2Q6ZNJ1 2754 aa14.01□□□□□ -0.17
HERC1-207ENST00000560316 A0A0G2JPF8 293 aa14.01□□□□□ -0.17
HERC1-207ENST00000560316 HNRNPCL2B2RXH8 293 aa14.01□□□□□ -0.17
HERC1-207ENST00000560316 HNRNPCL3B7ZW38 293 aa14.01□□□□□ -0.17
HERC1-207ENST00000560316 LRRN3E7EW58 273 aa14.01□□□□□ -0.17
HERC1-207ENST00000560316 HNRNPCL1O60812 293 aaKnown RBP14.01□□□□□ -0.17
HERC1-207ENST00000560316 SNAP29O95721 258 aa14.01□□□□□ -0.17
HERC1-207ENST00000560316 ALDOCP09972 364 aaKnown RBP14.01□□□□□ -0.17
HERC1-207ENST00000560316 SBK2P0C263 348 aa14.01□□□□□ -0.17
HERC1-207ENST00000560316 HNRNPCL4P0DMR1 293 aa14.01□□□□□ -0.17
HERC1-207ENST00000560316 LBPP18428 481 aa14.01□□□□□ -0.17
HERC1-207ENST00000560316 SLC3A1Q07837 685 aa14.01□□□□□ -0.17
HERC1-207ENST00000560316 TBC1D28Q2M2D7 210 aa14.01□□□□□ -0.17
HERC1-207ENST00000560316 ALG10BQ5I7T1 473 aa14.01□□□□□ -0.17
HERC1-207ENST00000560316 SPATA46Q5T0L3 261 aa14.01□□□□□ -0.17
HERC1-207ENST00000560316 TMEM53Q6P2H8 277 aa14.01□□□□□ -0.17
HERC1-207ENST00000560316 BRICD5Q6PL45 260 aa14.01□□□□□ -0.17
HERC1-207ENST00000560316 RHOUQ7L0Q8 258 aa14.01□□□□□ -0.17
HERC1-207ENST00000560316 SCAIQ8N9R8 606 aa14.01□□□□□ -0.17
HERC1-207ENST00000560316 OR1J1Q8NGS3 322 aa14.01□□□□□ -0.17
HERC1-207ENST00000560316 GEMIN6Q8WXD5 167 aaKnown RBP14.01□□□□□ -0.17
HERC1-207ENST00000560316 ANP32BQ92688 251 aaKnown RBP14.01□□□□□ -0.17
HERC1-207ENST00000560316 TMEM54Q969K7 222 aa14.01□□□□□ -0.17
HERC1-207ENST00000560316 RSPO3Q9BXY4 272 aaPredicted RBP14.01□□□□□ -0.17
HERC1-207ENST00000560316 TMEM38BQ9NVV0 291 aa14.01□□□□□ -0.17
HERC1-207ENST00000560316 GLTPQ9NZD2 209 aa14.01□□□□□ -0.17
HERC1-207ENST00000560316 EGFL7Q9UHF1 273 aa14.01□□□□□ -0.17
HERC1-207ENST00000560316 NPTNQ9Y639 398 aa14.01□□□□□ -0.17
HERC1-207ENST00000560316 ZSCAN5BA6NJL1 495 aa14□□□□□ -0.17
HERC1-207ENST00000560316 C11orf98E9PRG8 122 aa14□□□□□ -0.17
HERC1-207ENST00000560316 M0QZ24 198 aa14□□□□□ -0.17
HERC1-207ENST00000560316 PLPP3O14495 311 aa14□□□□□ -0.17
HERC1-207ENST00000560316 RFXANKO14593 260 aa14□□□□□ -0.17
HERC1-207ENST00000560316 TM9SF1O15321 606 aa14□□□□□ -0.17
HERC1-207ENST00000560316 MFN2O95140 757 aa14□□□□□ -0.17
HERC1-207ENST00000560316 IGHV2-70P01814 119 aa14□□□□□ -0.17
HERC1-207ENST00000560316 MPV17P39210 176 aa14□□□□□ -0.17
HERC1-207ENST00000560316 MTNR1AP48039 350 aa14□□□□□ -0.17
HERC1-207ENST00000560316 MMP15P51511 669 aa14□□□□□ -0.17
HERC1-207ENST00000560316 GTDC1Q4AE62 458 aa14□□□□□ -0.17
HERC1-207ENST00000560316 LRFN4Q6PJG9 635 aa14□□□□□ -0.17
HERC1-207ENST00000560316 PXKQ7Z7A4 578 aa14□□□□□ -0.17
HERC1-207ENST00000560316 COMTD1Q86VU5 262 aa14□□□□□ -0.17
HERC1-207ENST00000560316 PARP8Q8N3A8 854 aa14□□□□□ -0.17
HERC1-207ENST00000560316 C10orf53Q8N6V4 93 aa14□□□□□ -0.17
HERC1-207ENST00000560316 LSMEM1Q8N8F7 131 aa14□□□□□ -0.17
HERC1-207ENST00000560316 OR4K5Q8NGD3 323 aa14□□□□□ -0.17
HERC1-207ENST00000560316 OR52E2Q8NGJ4 325 aa14□□□□□ -0.17
HERC1-207ENST00000560316 OR1J2Q8NGS2 313 aa14□□□□□ -0.17
HERC1-207ENST00000560316 DNAJA4Q8WW22 397 aaPredicted RBP14□□□□□ -0.17
HERC1-207ENST00000560316 PKNOX2Q96KN3 472 aa14□□□□□ -0.17
HERC1-207ENST00000560316 CITED1Q99966 193 aa14□□□□□ -0.17
HERC1-207ENST00000560316 NUF2Q9BZD4 464 aa14□□□□□ -0.17
HERC1-207ENST00000560316 C20orf27Q9GZN8 174 aa14□□□□□ -0.17
HERC1-207ENST00000560316 MRPL39Q9NYK5 338 aaKnown RBP14□□□□□ -0.17
HERC1-207ENST00000560316 POLR3KQ9Y2Y1 108 aaPredicted RBP14□□□□□ -0.17
HERC1-207ENST00000560316 WDR91A4D1P6 747 aa13.99□□□□□ -0.17
HERC1-207ENST00000560316 FAM181BA6NEQ2 426 aa13.99□□□□□ -0.17
HERC1-207ENST00000560316 HOXA3O43365 443 aaPredicted RBP13.99□□□□□ -0.17
HERC1-207ENST00000560316 FARS2O95363 451 aaKnown RBP13.99□□□□□ -0.17
HERC1-207ENST00000560316 NUDT7P0C024 238 aa13.99□□□□□ -0.17
HERC1-207ENST00000560316 MYZAPP0CAP1 466 aa13.99□□□□□ -0.17
HERC1-207ENST00000560316 THEM4Q5T1C6 240 aa13.99□□□□□ -0.17
HERC1-207ENST00000560316 NUDCD3Q8IVD9 361 aa13.99□□□□□ -0.17
HERC1-207ENST00000560316 OR6S1Q8NH40 331 aa13.99□□□□□ -0.17
HERC1-207ENST00000560316 IPCEF1Q8WWN9 437 aaPredicted RBP13.99□□□□□ -0.17
HERC1-207ENST00000560316 SLC35B4Q969S0 331 aa13.99□□□□□ -0.17
HERC1-207ENST00000560316 EGLN1Q9GZT9 426 aa13.99□□□□□ -0.17
HERC1-207ENST00000560316 LRMDAQ9H2I8 198 aa13.99□□□□□ -0.17
HERC1-207ENST00000560316 C1orf198Q9H425 327 aa13.99□□□□□ -0.17
HERC1-207ENST00000560316 TPT1P8Q9HAU6 139 aa13.99□□□□□ -0.17
HERC1-207ENST00000560316 PATZ1Q9HBE1 687 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms