RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 SLCO5A1Q9H2Y9 848 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 OR52D1Q9H346 318 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 TMEM27Q9HBJ8 222 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 NIT2Q9NQR4 276 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 TREM2Q9NZC2 230 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 CNIH4Q9P003 139 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 NCDNQ9UBB6 729 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 TRPC4Q9UBN4 977 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 ZNF223Q9UK11 482 aaPredicted RBP5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 FBXL4Q9UKA2 621 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 ICAM5Q9UMF0 924 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 POLR2AP24928 1970 aaKnown RBP5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 TTC3P53804 2025 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 COL4A3Q01955 1670 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 TBC1D3EA0A087X179 549 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 TRBV6-7A0A0A0MS04 114 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 A0A0A6YYH2 397 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 A0A0B4J203 849 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 TMEM272A0A1B0GTI8 110 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 TSPAN11A1L157 253 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 METTL21EPA6NDL7 271 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 ZNF840PA6NDX5 716 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 ANTXRLA6NF34 631 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 A6NJ64 397 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 ARGFXA6NJG6 315 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 COLCA2A8K830 154 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 WASH3PC4AMC7 463 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 E9PI62 339 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 SULT2B1O00204 365 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 KIAA0355O15063 1070 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 PPM1DO15297 605 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 MAGEB4O15481 346 aaPredicted RBP5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 P2RX6O15547 441 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 EMC8O43402 210 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 COCHO43405 550 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 SLC25A12O75746 678 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 CH25HO95992 272 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 AK1P00568 194 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 IGHV2-5P01817 119 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 MT-ND4LP03901 98 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 KLKB1P03952 638 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 HOXC4P09017 264 aaPredicted RBP5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 ERGP11308 486 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 SRMP19623 302 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 MALP21145 153 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 ABCD3P28288 659 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 DCTDP32321 178 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 MAS1LP35410 378 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 DLSTP36957 453 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 HSD17B2P37059 387 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 MAP3K8P41279 467 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 MC3RP41968 323 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 GPR4P46093 362 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 SLC6A9P48067 706 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 CENPAP49450 140 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 RAB5CP51148 216 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 LUMP51884 338 aaPredicted RBP5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 PNLIPRP2P54317 469 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 TAS2R38P59533 333 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 RPS11P62280 158 aaKnown RBP eCLIP5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 POLR2LP62875 67 aaKnown RBP5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 SIRPAP78324 504 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 REEP5Q00765 189 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 MEF2AQ02078 507 aaPredicted RBP5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 HSPB3Q12988 150 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 TDGQ13569 410 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 ARHGAP19Q14CB8 494 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 ZNF658BQ4V348 819 aaPredicted RBP5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 FAM74A1Q5RGS3 127 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 LY6G6FQ5SQ64 297 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 PRAMEF14Q5SWL7 426 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 TMEM244Q5VVB8 128 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 DCAF12L2Q5VW00 463 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 RAB12Q6IQ22 244 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 FAHD2BQ6P2I3 314 aaPredicted RBP5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 ZNF613Q6PF04 617 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 FIP1L1Q6UN15 594 aaKnown RBP5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 GDPD4Q6W3E5 623 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 Q6ZVL8 140 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 FCRLAQ7L513 359 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 TMPRSS9Q7Z410 1059 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 GDF7Q7Z4P5 450 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 TMCO2Q7Z6W1 182 aaPredicted RBP5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 GGNQ86UU5 652 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 RANBP3LQ86VV4 465 aaPredicted RBP5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 CBLN2Q8IUK8 224 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 TRAPPC5Q8IUR0 188 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 NRMQ8IXM6 262 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 SLC35F3Q8IY50 421 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 CDK20Q8IZL9 346 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 MUC20Q8N307 709 aaPredicted RBP5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 GTPBP8Q8N3Z3 284 aaPredicted RBP5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 RASGEF1AQ8N9B8 481 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 WDSUB1Q8N9V3 476 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 SDR9C7Q8NEX9 313 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 OR4C16Q8NGL9 310 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 OR5J2Q8NH18 312 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 SNX33Q8WV41 574 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 PIGKQ92643 395 aa5.41□□□□□ -1.54
SNRPA1-209ENST00000560307 CPNE4Q96A23 557 aaPredicted RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms