RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 APLNRP35414 380 aa10.85□□□□□ -0.67
SNX1-209ENST00000559961 RBM34P42696 430 aaKnown RBP10.85□□□□□ -0.67
SNX1-209ENST00000559961 GPR6P46095 362 aaPredicted RBP10.85□□□□□ -0.67
SNX1-209ENST00000559961 HSF2Q03933 536 aa10.85□□□□□ -0.67
SNX1-209ENST00000559961 DEF8Q6ZN54 512 aa10.85□□□□□ -0.67
SNX1-209ENST00000559961 CARM1Q86X55 608 aa10.85□□□□□ -0.67
SNX1-209ENST00000559961 CDK20Q8IZL9 346 aa10.85□□□□□ -0.67
SNX1-209ENST00000559961 ZCCHC24Q8N2G6 241 aaKnown RBP10.85□□□□□ -0.67
SNX1-209ENST00000559961 SLC30A7Q8NEW0 376 aa10.85□□□□□ -0.67
SNX1-209ENST00000559961 OR8J3Q8NGG0 315 aa10.85□□□□□ -0.67
SNX1-209ENST00000559961 RDH5Q92781 318 aa10.85□□□□□ -0.67
SNX1-209ENST00000559961 SGTBQ96EQ0 304 aa10.85□□□□□ -0.67
SNX1-209ENST00000559961 SNX18Q96RF0 628 aa10.85□□□□□ -0.67
SNX1-209ENST00000559961 SYT3Q9BQG1 590 aa10.85□□□□□ -0.67
SNX1-209ENST00000559961 CCNB1IP1Q9NPC3 277 aa10.85□□□□□ -0.67
SNX1-209ENST00000559961 SLCO1C1Q9NYB5 712 aa10.85□□□□□ -0.67
SNX1-209ENST00000559961 EIF3KQ9UBQ5 218 aaKnown RBP10.85□□□□□ -0.67
SNX1-209ENST00000559961 TMEFF2Q9UIK5 374 aaPredicted RBP10.85□□□□□ -0.67
SNX1-209ENST00000559961 AP3M1Q9Y2T2 418 aa10.85□□□□□ -0.67
SNX1-209ENST00000559961 HEATR1Q9H583 2144 aaKnown RBP10.85□□□□□ -0.67
SNX1-209ENST00000559961 ALPK2Q86TB3 2170 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 ABCA1O95477 2261 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 TMEM129A0AVI4 362 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 LRP5LA4QPB2 252 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 HTR3EA5X5Y0 456 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 ZNF503-AS2A6NEH8 195 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 CENPBD1B2RD01 187 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 OR5F1O95221 314 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 MT-ND1P03886 318 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 ANPEPP15144 967 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 TCN1P20061 433 aaPredicted RBP10.84□□□□□ -0.67
SNX1-209ENST00000559961 ACHEP22303 614 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 IGFBP5P24593 272 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 ARFIP2P53365 341 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 CDH15P55291 814 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 TMEM33P57088 247 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 TEKQ02763 1124 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 SELPLGQ14242 412 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 MELKQ14680 651 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 CR1LQ2VPA4 569 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 NRN1LQ496H8 165 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 COQ5Q5HYK3 327 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 NANOGP8Q6NSW7 305 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 CCDC80Q76M96 950 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 MYPOPQ86VE0 399 aaPredicted RBP10.84□□□□□ -0.67
SNX1-209ENST00000559961 RETREG3Q86VR2 466 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 RBM45Q8IUH3 476 aaKnown RBP10.84□□□□□ -0.67
SNX1-209ENST00000559961 SKA3Q8IX90 412 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 TEX29Q8N6K0 151 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 ARIH2OSQ8N7S6 290 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 ICA1LQ8NDH6 482 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 RBM15BQ8NDT2 890 aaKnown RBP10.84□□□□□ -0.67
SNX1-209ENST00000559961 GPR32P1Q8NGA4 272 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 OR4K5Q8NGD3 323 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 SYNPRQ8TBG9 265 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 TAMM41Q96BW9 452 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 LRRC58Q96CX6 371 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 RBP7Q96R05 134 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 WFDC6Q9BQY6 131 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 ZNF416Q9BWM5 594 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 TMEM120AQ9BXJ8 343 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 MRPL37Q9BZE1 423 aaKnown RBP10.84□□□□□ -0.67
SNX1-209ENST00000559961 BCL2L14Q9BZR8 327 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 PCDHAC1Q9H158 963 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 ZNF385DQ9H6B1 395 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 NANOGQ9H9S0 305 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 INIPQ9NRY2 104 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 DECR2Q9NUI1 292 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 TMEM38BQ9NVV0 291 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 TAS2R5Q9NYW4 299 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 MED31Q9Y3C7 131 aa10.84□□□□□ -0.67
SNX1-209ENST00000559961 B4DSR2 109 aa10.83□□□□□ -0.68
SNX1-209ENST00000559961 MRASO14807 208 aa10.83□□□□□ -0.68
SNX1-209ENST00000559961 PPIHO43447 177 aaKnown RBP10.83□□□□□ -0.68
SNX1-209ENST00000559961 TACSTD2P09758 323 aa10.83□□□□□ -0.68
SNX1-209ENST00000559961 ASAH2BP0C7U1 165 aa10.83□□□□□ -0.68
SNX1-209ENST00000559961 THRBP10828 461 aa10.83□□□□□ -0.68
SNX1-209ENST00000559961 CCNOP22674 350 aa10.83□□□□□ -0.68
SNX1-209ENST00000559961 ALDH3B1P43353 468 aa10.83□□□□□ -0.68
SNX1-209ENST00000559961 KLF3P57682 345 aaPredicted RBP10.83□□□□□ -0.68
SNX1-209ENST00000559961 TAF11Q15544 211 aa10.83□□□□□ -0.68
SNX1-209ENST00000559961 PCGF3Q3KNV8 242 aa10.83□□□□□ -0.68
SNX1-209ENST00000559961 SHQ1Q6PI26 577 aaKnown RBP10.83□□□□□ -0.68
SNX1-209ENST00000559961 GLCCI1Q86VQ1 547 aa10.83□□□□□ -0.68
SNX1-209ENST00000559961 PHC2Q8IXK0 858 aa10.83□□□□□ -0.68
SNX1-209ENST00000559961 ALDH16A1Q8IZ83 802 aa10.83□□□□□ -0.68
SNX1-209ENST00000559961 LRRC17Q8N6Y2 441 aa10.83□□□□□ -0.68
SNX1-209ENST00000559961 SYT14Q8NB59 555 aa10.83□□□□□ -0.68
SNX1-209ENST00000559961 FNDC8Q8TC99 324 aa10.83□□□□□ -0.68
SNX1-209ENST00000559961 TMEM239Q8WW34 195 aa10.83□□□□□ -0.68
SNX1-209ENST00000559961 TPD52L3Q96J77 140 aa10.83□□□□□ -0.68
SNX1-209ENST00000559961 SH3GL3Q99963 347 aa10.83□□□□□ -0.68
SNX1-209ENST00000559961 RSPO3Q9BXY4 272 aaPredicted RBP10.83□□□□□ -0.68
SNX1-209ENST00000559961 NDEL1Q9GZM8 345 aa10.83□□□□□ -0.68
SNX1-209ENST00000559961 TAAR3PQ9P1P4 343 aa10.83□□□□□ -0.68
SNX1-209ENST00000559961 RIMS3Q9UJD0 308 aa10.83□□□□□ -0.68
SNX1-209ENST00000559961 GRIP1Q9Y3R0 1128 aa10.83□□□□□ -0.68
SNX1-209ENST00000559961 HAX1O00165 279 aa10.82□□□□□ -0.68
SNX1-209ENST00000559961 GSTA4O15217 222 aa10.82□□□□□ -0.68
SNX1-209ENST00000559961 OR7A10O76100 309 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms