RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 ALG12Q9BV10 488 aa12.67□□□□□ -0.38
SMAD6-204ENST00000559931 RBM24Q9BX46 236 aaKnown RBP12.67□□□□□ -0.38
SMAD6-204ENST00000559931 GABARAPL3Q9BY60 117 aa12.67□□□□□ -0.38
SMAD6-204ENST00000559931 PRRG3Q9BZD7 231 aa12.67□□□□□ -0.38
SMAD6-204ENST00000559931 ULBP2Q9BZM5 246 aa12.67□□□□□ -0.38
SMAD6-204ENST00000559931 LINC00470Q9BZP3 86 aa12.67□□□□□ -0.38
SMAD6-204ENST00000559931 SLC25A19Q9HC21 320 aa12.67□□□□□ -0.38
SMAD6-204ENST00000559931 LRRK2Q5S007 2527 aa12.67□□□□□ -0.38
SMAD6-204ENST00000559931 NKX2-6A6NCS4 301 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 ZAR1LA6NP61 321 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 A8MXE2 369 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 CENPBD1B2RD01 187 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 AHCYL1O43865 530 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 CLDN14O95500 239 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 ZNF3P17036 446 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 AGAP20933 346 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 CENPAP49450 140 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 ROR2Q01974 943 aaKnown RBP12.66□□□□□ -0.38
SMAD6-204ENST00000559931 SNCBQ16143 134 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 PHYHD1Q5SRE7 291 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 THEM4Q5T1C6 240 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 SLX4IPQ5VYV7 408 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 Q6ZT83 130 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 PTCHD4Q6ZW05 846 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 FAM26EQ8N5C1 309 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 DHRSXQ8N5I4 330 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 CYB561A3Q8NBI2 242 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 SDR9C7Q8NEX9 313 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 FNDC8Q8TC99 324 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 ITLN2Q8WWU7 325 aaPredicted RBP12.66□□□□□ -0.38
SMAD6-204ENST00000559931 NSMAFQ92636 917 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 MCHR2Q969V1 340 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 RDH12Q96NR8 316 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 ALKBH3Q96Q83 286 aaPredicted RBP12.66□□□□□ -0.38
SMAD6-204ENST00000559931 MBOAT4Q96T53 435 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 KCNK17Q96T54 332 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 MRPL13Q9BYD1 178 aaKnown RBP12.66□□□□□ -0.38
SMAD6-204ENST00000559931 CRLF2Q9HC73 371 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 GPR35Q9HC97 309 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 SRA1Q9HD15 236 aaKnown RBP12.66□□□□□ -0.38
SMAD6-204ENST00000559931 IMPAD1Q9NX62 359 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 GMPPBQ9Y5P6 360 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 COL12A1Q99715 3063 aa12.66□□□□□ -0.38
SMAD6-204ENST00000559931 CIB4A0PJX0 185 aa12.65□□□□□ -0.38
SMAD6-204ENST00000559931 SLC22A23A1A5C7 686 aa12.65□□□□□ -0.38
SMAD6-204ENST00000559931 SLC16A7O60669 478 aa12.65□□□□□ -0.38
SMAD6-204ENST00000559931 SLC2A10O95528 541 aa12.65□□□□□ -0.38
SMAD6-204ENST00000559931 CNOT4O95628 575 aaKnown RBP12.65□□□□□ -0.38
SMAD6-204ENST00000559931 PAICSP22234 425 aaKnown RBP12.65□□□□□ -0.38
SMAD6-204ENST00000559931 GUCA1AP43080 201 aaPredicted RBP12.65□□□□□ -0.38
SMAD6-204ENST00000559931 ASCL1P50553 236 aa12.65□□□□□ -0.38
SMAD6-204ENST00000559931 ZNF84P51523 738 aa12.65□□□□□ -0.38
SMAD6-204ENST00000559931 CDC42P60953 191 aa12.65□□□□□ -0.38
SMAD6-204ENST00000559931 FMODQ06828 376 aa12.65□□□□□ -0.38
SMAD6-204ENST00000559931 CEACAM16Q2WEN9 425 aa12.65□□□□□ -0.38
SMAD6-204ENST00000559931 LRFN4Q6PJG9 635 aa12.65□□□□□ -0.38
SMAD6-204ENST00000559931 ZNF474Q6S9Z5 364 aaPredicted RBP12.65□□□□□ -0.38
SMAD6-204ENST00000559931 CXorf67Q86X51 503 aaPredicted RBP12.65□□□□□ -0.38
SMAD6-204ENST00000559931 SLC37A3Q8NCC5 494 aa12.65□□□□□ -0.38
SMAD6-204ENST00000559931 GRIP2Q9C0E4 1043 aa12.65□□□□□ -0.38
SMAD6-204ENST00000559931 SYT4Q9H2B2 425 aa12.65□□□□□ -0.38
SMAD6-204ENST00000559931 RPRD1BQ9NQG5 326 aaKnown RBP12.65□□□□□ -0.38
SMAD6-204ENST00000559931 CMC2Q9NRP2 79 aa12.65□□□□□ -0.38
SMAD6-204ENST00000559931 FAM118AQ9NWS6 357 aa12.65□□□□□ -0.38
SMAD6-204ENST00000559931 ELOVL5Q9NYP7 299 aa12.65□□□□□ -0.38
SMAD6-204ENST00000559931 FOXD3Q9UJU5 478 aaPredicted RBP12.65□□□□□ -0.38
SMAD6-204ENST00000559931 ICE1Q9Y2F5 2266 aa12.65□□□□□ -0.38
SMAD6-204ENST00000559931 LOC100130705A0A1B0GUX0 176 aa12.64□□□□□ -0.39
SMAD6-204ENST00000559931 OR6C68A6NDL8 312 aa12.64□□□□□ -0.39
SMAD6-204ENST00000559931 PRR23D1E9PI22 279 aaPredicted RBP12.64□□□□□ -0.39
SMAD6-204ENST00000559931 SURF4O15260 269 aa12.64□□□□□ -0.39
SMAD6-204ENST00000559931 DHHO43323 396 aa12.64□□□□□ -0.39
SMAD6-204ENST00000559931 LYZL6O75951 148 aa12.64□□□□□ -0.39
SMAD6-204ENST00000559931 PRR23D2P0DMB1 279 aaPredicted RBP12.64□□□□□ -0.39
SMAD6-204ENST00000559931 MPGP29372 298 aa12.64□□□□□ -0.39
SMAD6-204ENST00000559931 VHLP40337 213 aa12.64□□□□□ -0.39
SMAD6-204ENST00000559931 TGFBR3Q03167 851 aa12.64□□□□□ -0.39
SMAD6-204ENST00000559931 CRMP1Q14194 572 aa12.64□□□□□ -0.39
SMAD6-204ENST00000559931 P2RY6Q15077 328 aa12.64□□□□□ -0.39
SMAD6-204ENST00000559931 CDSNQ15517 529 aa12.64□□□□□ -0.39
SMAD6-204ENST00000559931 HIST3H3Q16695 136 aa12.64□□□□□ -0.39
SMAD6-204ENST00000559931 DNM1P34Q6PK57 102 aa12.64□□□□□ -0.39
SMAD6-204ENST00000559931 LINGO2Q7L985 606 aa12.64□□□□□ -0.39
SMAD6-204ENST00000559931 TCEANCQ8N8B7 351 aa12.64□□□□□ -0.39
SMAD6-204ENST00000559931 NPEPL1Q8NDH3 523 aa12.64□□□□□ -0.39
SMAD6-204ENST00000559931 FAM81AQ8TBF8 368 aa12.64□□□□□ -0.39
SMAD6-204ENST00000559931 SSC4DQ8WTU2 575 aa12.64□□□□□ -0.39
SMAD6-204ENST00000559931 HRASLS5Q96KN8 279 aa12.64□□□□□ -0.39
SMAD6-204ENST00000559931 IL4I1Q96RQ9 567 aa12.64□□□□□ -0.39
SMAD6-204ENST00000559931 NUAK2Q9H093 628 aa12.64□□□□□ -0.39
SMAD6-204ENST00000559931 FN3KQ9H479 309 aa12.64□□□□□ -0.39
SMAD6-204ENST00000559931 SEC61A2Q9H9S3 476 aa12.64□□□□□ -0.39
SMAD6-204ENST00000559931 VSX1Q9NZR4 365 aaPredicted RBP12.64□□□□□ -0.39
SMAD6-204ENST00000559931 JKAMPQ9P055 326 aa12.64□□□□□ -0.39
SMAD6-204ENST00000559931 H2AFY2Q9P0M6 372 aaPredicted RBP12.64□□□□□ -0.39
SMAD6-204ENST00000559931 MALT1Q9UDY8 824 aa12.64□□□□□ -0.39
SMAD6-204ENST00000559931 GPR52Q9Y2T5 361 aa12.64□□□□□ -0.39
SMAD6-204ENST00000559931 SPTAN1Q13813 2472 aaKnown RBP12.63□□□□□ -0.39
SMAD6-204ENST00000559931 A0A1W2PPL8 197 aa12.63□□□□□ -0.39
SMAD6-204ENST00000559931 FAM183AA6NL82 134 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms