RNA–Protein interactions for RNA: ENST00000558954.5

RABGGTA-208, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-208ENST00000558954 A0A096LPE4 126 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 ARPC4-TTLL3A0A0A6YYG9 625 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 A0A1W2PPZ6 126 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 ARRDC5A6NEK1 342 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 CYSRT1A8MQ03 144 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 XKRYO14609 159 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 DHHO43323 396 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 DEAF1O75398 565 aaPredicted RBP16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 SEC14L2O76054 403 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 QDPRP09417 244 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 B4GALT1P15291 398 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 LOXP28300 417 aaPredicted RBP16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 SLC6A6P31641 620 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 BSPH1Q075Z2 132 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 CCNIQ14094 377 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 GPR139Q6DWJ6 353 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 LRFN4Q6PJG9 635 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 TMEM108Q6UXF1 575 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 THSD4Q6ZMP0 1018 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 ZNF813Q6ZN06 617 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 DPY19L2P2Q6ZN68 376 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 ZNF620Q6ZNG0 422 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 ZNF627Q7L945 461 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 FAM122BQ7Z309 247 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 OR10G2Q8NGC3 310 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 HDAC2Q92769 488 aaKnown RBP16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 UTP4Q969X6 686 aaKnown RBP16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 SLCO4A1Q96BD0 722 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 HS3ST6Q96QI5 342 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 NRIP3Q9NQ35 241 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 NPAP1Q9NZP6 1156 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 IL20RAQ9UHF4 553 aa16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 ZNF346Q9UL40 294 aaKnown RBP16.52■□□□□ 0.24
RABGGTA-208ENST00000558954 LRBAP50851 2863 aa16.52■□□□□ 0.23
RABGGTA-208ENST00000558954 CD3EP07766 207 aa16.51■□□□□ 0.23
RABGGTA-208ENST00000558954 GSTM3P21266 225 aa16.51■□□□□ 0.23
RABGGTA-208ENST00000558954 SDHAP31040 664 aa16.51■□□□□ 0.23
RABGGTA-208ENST00000558954 ZNF84P51523 738 aa16.51■□□□□ 0.23
RABGGTA-208ENST00000558954 RPS6KA3P51812 740 aa16.51■□□□□ 0.23
RABGGTA-208ENST00000558954 ZNF133P52736 654 aaPredicted RBP16.51■□□□□ 0.23
RABGGTA-208ENST00000558954 MYBPC1Q00872 1141 aa16.51■□□□□ 0.23
RABGGTA-208ENST00000558954 KRR1Q13601 381 aaKnown RBP16.51■□□□□ 0.23
RABGGTA-208ENST00000558954 NCMAPQ5T1S8 102 aa16.51■□□□□ 0.23
RABGGTA-208ENST00000558954 C10orf128Q5T292 105 aa16.51■□□□□ 0.23
RABGGTA-208ENST00000558954 YTHDF3Q7Z739 585 aaKnown RBP16.51■□□□□ 0.23
RABGGTA-208ENST00000558954 ADCK1Q86TW2 530 aa16.51■□□□□ 0.23
RABGGTA-208ENST00000558954 CCDC36Q8IYA8 594 aa16.51■□□□□ 0.23
RABGGTA-208ENST00000558954 OR52L1Q8NGH7 329 aa16.51■□□□□ 0.23
RABGGTA-208ENST00000558954 GIPC3Q8TF64 312 aa16.51■□□□□ 0.23
RABGGTA-208ENST00000558954 MCHR2Q969V1 340 aa16.51■□□□□ 0.23
RABGGTA-208ENST00000558954 Q96M85 177 aa16.51■□□□□ 0.23
RABGGTA-208ENST00000558954 DGCR6LQ9BY27 220 aa16.51■□□□□ 0.23
RABGGTA-208ENST00000558954 MGAT4BQ9UQ53 548 aa16.51■□□□□ 0.23
RABGGTA-208ENST00000558954 RNF115Q9Y4L5 304 aa16.51■□□□□ 0.23
RABGGTA-208ENST00000558954 CDH10Q9Y6N8 788 aa16.51■□□□□ 0.23
RABGGTA-208ENST00000558954 TEX13CA0A0J9YWL9 993 aa16.5■□□□□ 0.23
RABGGTA-208ENST00000558954 TIPRLO75663 272 aa16.5■□□□□ 0.23
RABGGTA-208ENST00000558954 APEHP13798 732 aaKnown RBP16.5■□□□□ 0.23
RABGGTA-208ENST00000558954 CAPZA2P47755 286 aa16.5■□□□□ 0.23
RABGGTA-208ENST00000558954 ZNF83P51522 516 aa16.5■□□□□ 0.23
RABGGTA-208ENST00000558954 IST1P53990 364 aa16.5■□□□□ 0.23
RABGGTA-208ENST00000558954 RFX4Q33E94 735 aa16.5■□□□□ 0.23
RABGGTA-208ENST00000558954 MESTQ5EB52 335 aa16.5■□□□□ 0.23
RABGGTA-208ENST00000558954 THEM4Q5T1C6 240 aa16.5■□□□□ 0.23
RABGGTA-208ENST00000558954 NANOS1Q8WY41 292 aaKnown RBP16.5■□□□□ 0.23
RABGGTA-208ENST00000558954 NMD3Q96D46 503 aaKnown RBP16.5■□□□□ 0.23
RABGGTA-208ENST00000558954 RBP7Q96R05 134 aa16.5■□□□□ 0.23
RABGGTA-208ENST00000558954 ARMC1Q9NVT9 282 aa16.5■□□□□ 0.23
RABGGTA-208ENST00000558954 TMEM38BQ9NVV0 291 aa16.5■□□□□ 0.23
RABGGTA-208ENST00000558954 EDARQ9UNE0 448 aa16.5■□□□□ 0.23
RABGGTA-208ENST00000558954 MAST4O15021 2626 aa16.5■□□□□ 0.23
RABGGTA-208ENST00000558954 A0A1W2PPR1 153 aa16.49■□□□□ 0.23
RABGGTA-208ENST00000558954 M0R1B8 84 aa16.49■□□□□ 0.23
RABGGTA-208ENST00000558954 ARHGEF9O43307 516 aa16.49■□□□□ 0.23
RABGGTA-208ENST00000558954 AHCYL1O43865 530 aa16.49■□□□□ 0.23
RABGGTA-208ENST00000558954 FARS2O95363 451 aaKnown RBP16.49■□□□□ 0.23
RABGGTA-208ENST00000558954 SLC2A10O95528 541 aa16.49■□□□□ 0.23
RABGGTA-208ENST00000558954 PPP1R3DO95685 299 aa16.49■□□□□ 0.23
RABGGTA-208ENST00000558954 GASTP01350 101 aa16.49■□□□□ 0.23
RABGGTA-208ENST00000558954 FCGR1AP12314 374 aa16.49■□□□□ 0.23
RABGGTA-208ENST00000558954 PTAFRP25105 342 aa16.49■□□□□ 0.23
RABGGTA-208ENST00000558954 FMODQ06828 376 aa16.49■□□□□ 0.23
RABGGTA-208ENST00000558954 NRN1LQ496H8 165 aa16.49■□□□□ 0.23
RABGGTA-208ENST00000558954 ZNF704Q6ZNC4 412 aaPredicted RBP16.49■□□□□ 0.23
RABGGTA-208ENST00000558954 RASSF6Q6ZTQ3 369 aa16.49■□□□□ 0.23
RABGGTA-208ENST00000558954 CLDN22Q8N7P3 220 aa16.49■□□□□ 0.23
RABGGTA-208ENST00000558954 GTPBP3Q969Y2 492 aaKnown RBP16.49■□□□□ 0.23
RABGGTA-208ENST00000558954 RASD2Q96D21 266 aa16.49■□□□□ 0.23
RABGGTA-208ENST00000558954 DUS3LQ96G46 650 aaKnown RBP16.49■□□□□ 0.23
RABGGTA-208ENST00000558954 SAMD8Q96LT4 415 aa16.49■□□□□ 0.23
RABGGTA-208ENST00000558954 RAB3IPQ96QF0 476 aaPredicted RBP16.49■□□□□ 0.23
RABGGTA-208ENST00000558954 TMEM204Q9BSN7 226 aa16.49■□□□□ 0.23
RABGGTA-208ENST00000558954 IFT27Q9BW83 186 aa16.49■□□□□ 0.23
RABGGTA-208ENST00000558954 C1QTNF6Q9BXI9 259 aa16.49■□□□□ 0.23
RABGGTA-208ENST00000558954 PLEKHF2Q9H8W4 249 aa16.49■□□□□ 0.23
RABGGTA-208ENST00000558954 PDP1Q9P0J1 537 aaPredicted RBP16.49■□□□□ 0.23
RABGGTA-208ENST00000558954 AP4S1Q9Y587 144 aa16.49■□□□□ 0.23
RABGGTA-208ENST00000558954 IER3IP1Q9Y5U9 82 aa16.49■□□□□ 0.23
RABGGTA-208ENST00000558954 PRSS37A4D1T9 235 aa16.48■□□□□ 0.23
RABGGTA-208ENST00000558954 DPRXA6NFQ7 191 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms