RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 NEUROG1Q92886 237 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 RNASE6Q93091 150 aaKnown RBP3.73□□□□□ -1.81
SPG11-211ENST00000558561 RPL36ALQ969Q0 106 aaKnown RBP3.73□□□□□ -1.81
SPG11-211ENST00000558561 TRIM63Q969Q1 353 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 MOAP1Q96BY2 351 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 KTI12Q96EK9 354 aaPredicted RBP3.73□□□□□ -1.81
SPG11-211ENST00000558561 ZNF583Q96ND8 569 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 ANKRD27Q96NW4 1050 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 TRNT1Q96Q11 434 aaKnown RBP3.73□□□□□ -1.81
SPG11-211ENST00000558561 OR5B2Q96R09 309 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 ZBTB18Q99592 522 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 RBM24Q9BX46 236 aaKnown RBP3.73□□□□□ -1.81
SPG11-211ENST00000558561 C1QTNF6Q9BXI9 259 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 KLHL4Q9C0H6 718 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 NMUR2Q9GZQ4 415 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 HOXD1Q9GZZ0 328 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 AAMDCQ9H7C9 122 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 PTGES2Q9H7Z7 377 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 NANOGQ9H9S0 305 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 PLSCR4Q9NRQ2 329 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 ACER3Q9NUN7 267 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 EXD2Q9NVH0 621 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 CMTM6Q9NX76 183 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 KLHL28Q9NXS3 571 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 ZNF629Q9UEG4 869 aaPredicted RBP3.73□□□□□ -1.81
SPG11-211ENST00000558561 MRTO4Q9UKD2 239 aaKnown RBP3.73□□□□□ -1.81
SPG11-211ENST00000558561 TMED7Q9Y3B3 224 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 AP4B1Q9Y6B7 739 aa3.73□□□□□ -1.81
SPG11-211ENST00000558561 DSPPQ9NZW4 1301 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 ACANP16112 2415 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 ARID1AO14497 2285 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 NPIPB13A6NJU9 1138 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 ZNF716A6NP11 495 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 NPIPB5A8MRT5 1133 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 DEFB108AA8MXU0 73 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 NPIPB4C9JG80 1138 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 MS4A18H0YCH9 400 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 MFN2O95140 757 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 AKR7A3O95154 331 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 LYPD3O95274 346 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 KRT75O95678 551 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 HPRP00739 348 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 ADAP00813 363 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 CSF1P09603 554 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 PABPC4LP0CB38 370 aaKnown RBP3.72□□□□□ -1.81
SPG11-211ENST00000558561 TFPIP10646 304 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 IL7RP16871 459 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 FUT1P19526 365 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 OPRM1P35372 400 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 PTGER4P35408 488 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 CPOXP36551 454 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 YAP1P46937 504 aaKnown RBP3.72□□□□□ -1.81
SPG11-211ENST00000558561 KHKP50053 298 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 ASCL1P50553 236 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 ATP4BP51164 291 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 ZNF81P51508 661 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 P2RY4P51582 365 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 ZNF41P51814 821 aaPredicted RBP3.72□□□□□ -1.81
SPG11-211ENST00000558561 IST1P53990 364 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 OR2B6P58173 313 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 CDK6Q00534 326 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 MYBPHQ13203 477 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 ALKBH1Q13686 389 aaKnown RBP3.72□□□□□ -1.81
SPG11-211ENST00000558561 CEACAM7Q14002 265 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 SQLEQ14534 574 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 RBMS2Q15434 407 aaKnown RBP3.72□□□□□ -1.81
SPG11-211ENST00000558561 ZNF239Q16600 458 aaKnown RBP3.72□□□□□ -1.81
SPG11-211ENST00000558561 MS4A18Q3C1V0 323 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 SLC25A35Q3KQZ1 300 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 ZNF311Q5JNZ3 666 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 PHYHD1Q5SRE7 291 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 C10orf25Q5T742 122 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 C9orf135Q5VTT2 229 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 NHLRC1Q6VVB1 395 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 STAC2Q6ZMT1 411 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 WDR88Q6ZMY6 472 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 DEF8Q6ZN54 512 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 TMPPEQ6ZT21 453 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 EIF3MQ7L2H7 374 aaKnown RBP3.72□□□□□ -1.81
SPG11-211ENST00000558561 FCRLAQ7L513 359 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 LINGO2Q7L985 606 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 TSEN54Q7Z6J9 526 aaKnown RBP3.72□□□□□ -1.81
SPG11-211ENST00000558561 MTERF4Q7Z6M4 381 aaKnown RBP3.72□□□□□ -1.81
SPG11-211ENST00000558561 SNX32Q86XE0 403 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 CALHM3Q86XJ0 350 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 CDC20BQ86Y33 519 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 ANKRD13BQ86YJ7 626 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 CADM2Q8N3J6 435 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 TMEM217Q8N7C4 229 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 RBM15BQ8NDT2 890 aaKnown RBP3.72□□□□□ -1.81
SPG11-211ENST00000558561 OR52E4Q8NGH9 312 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 ZNF563Q8TA94 476 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 C2CD4CQ8TF44 421 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 TAAR8Q969N4 342 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 LRRC58Q96CX6 371 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 TXNDC15Q96J42 360 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 KLHL15Q96M94 604 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 COG8Q96MW5 612 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 ZNF385AQ96PM9 386 aaKnown RBP3.72□□□□□ -1.81
SPG11-211ENST00000558561 CGREF1Q99674 301 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms