RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 OPN1SWP03999 348 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 ITGA2P17301 1181 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 CTRB1P17538 263 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 IGHV1-2P23083 117 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 AHCYP23526 432 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 GUCA1AP43080 201 aaPredicted RBP7.64□□□□□ -1.19
USP3-208ENST00000558285 DAP3P51398 398 aaKnown RBP7.64□□□□□ -1.19
USP3-208ENST00000558285 CLDN17P56750 224 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 SMIM11AP58511 58 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 SELENOWP63302 87 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 PLAURQ03405 335 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 LIPEQ05469 1076 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 RAB39AQ14964 217 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 DUSP7Q16829 419 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 LINC01559Q495D7 138 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 CDONQ4KMG0 1287 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 IFI44LQ53G44 452 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 CYBRD1Q53TN4 286 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 C4orf48Q5BLP8 95 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 NCMAPQ5T1S8 102 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 AGAP6Q5VW22 663 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 CTRB2Q6GPI1 263 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 ANKRD16Q6P6B7 361 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 IDO2Q6ZQW0 420 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 DPPA2Q7Z7J5 298 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 SPARTQ8N0X7 666 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 PARP8Q8N3A8 854 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 IL17RDQ8NFM7 739 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 OR13F1Q8NGS4 319 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 OR6N1Q8NGY5 312 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 ZNF417Q8TAU3 575 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 KTI12Q96EK9 354 aaPredicted RBP7.64□□□□□ -1.19
USP3-208ENST00000558285 SLC41A3Q96GZ6 507 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 MUS81Q96NY9 551 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 ZNF587Q96SQ5 575 aaPredicted RBP7.64□□□□□ -1.19
USP3-208ENST00000558285 FNDC11Q9BVV2 318 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 SLA2Q9H6Q3 261 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 SIAEQ9HAT2 523 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 BARX1Q9HBU1 254 aaPredicted RBP7.64□□□□□ -1.19
USP3-208ENST00000558285 ADA2Q9NZK5 511 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 ING1Q9UK53 422 aaPredicted RBP7.64□□□□□ -1.19
USP3-208ENST00000558285 CHST2Q9Y4C5 530 aa7.64□□□□□ -1.19
USP3-208ENST00000558285 ABCA12Q86UK0 2595 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 SAC3D1A6NKF1 404 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 FAM25AB3EWG3 89 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 FAM25CB3EWG5 89 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 FAM25GB3EWG6 89 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 MCIDASD6RGH6 385 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 FTCDNL1E5RQL4 147 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 FXYD1O00168 92 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 CXCR6O00574 342 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 RNF13O43567 381 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 SEC14L2O76054 403 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 FARS2O95363 451 aaKnown RBP7.63□□□□□ -1.19
USP3-208ENST00000558285 ZNF682O95780 498 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 IGHV3-9P01782 118 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 ADORA3P0DMS8 318 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 HTR2AP28223 471 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 SERPINB10P48595 397 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 SLC7A2P52569 658 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 TPTEP56180 551 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 P2RX3P56373 397 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 RPS4XP62701 263 aaKnown RBP7.63□□□□□ -1.19
USP3-208ENST00000558285 CHRNB3Q05901 458 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 GK3PQ14409 553 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 FGD3Q5JSP0 725 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 SAMD4BQ5PRF9 694 aaKnown RBP7.63□□□□□ -1.19
USP3-208ENST00000558285 SLC22A25Q6T423 547 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 PRSS57Q6UWY2 283 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 RFPL4BQ6ZWI9 263 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 ZNF511Q8NB15 262 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 OR6T1Q8NGN1 323 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 MAGEE2Q8TD90 523 aaPredicted RBP7.63□□□□□ -1.19
USP3-208ENST00000558285 TAAR8Q969N4 342 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 ASB9Q96DX5 294 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 DNAJA3Q96EY1 480 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 LRR1Q96L50 414 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 PRRC1Q96M27 445 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 ZNF583Q96ND8 569 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 CXXC4Q9H2H0 198 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 KCNN2Q9H2S1 579 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 AKIP1Q9NQ31 210 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 MAGEL2Q9UJ55 1249 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 SLC7A7Q9UM01 511 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 POFUT2Q9Y2G5 429 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 SPEF1Q9Y4P9 236 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 UGT2A1Q9Y4X1 527 aa7.63□□□□□ -1.19
USP3-208ENST00000558285 KLF4O43474 513 aa7.62□□□□□ -1.19
USP3-208ENST00000558285 FZD7O75084 574 aa7.62□□□□□ -1.19
USP3-208ENST00000558285 CRYAAP02489 173 aa7.62□□□□□ -1.19
USP3-208ENST00000558285 THBDP07204 575 aa7.62□□□□□ -1.19
USP3-208ENST00000558285 ERCC1P07992 297 aaPredicted RBP7.62□□□□□ -1.19
USP3-208ENST00000558285 FOSL1P15407 271 aa7.62□□□□□ -1.19
USP3-208ENST00000558285 PSMA6P60900 246 aaKnown RBP7.62□□□□□ -1.19
USP3-208ENST00000558285 PSME3P61289 254 aa7.62□□□□□ -1.19
USP3-208ENST00000558285 NKX6-1P78426 367 aaPredicted RBP7.62□□□□□ -1.19
USP3-208ENST00000558285 POU3F1Q03052 451 aaPredicted RBP7.62□□□□□ -1.19
USP3-208ENST00000558285 TRAM2Q15035 370 aa7.62□□□□□ -1.19
USP3-208ENST00000558285 GABRA6Q16445 453 aa7.62□□□□□ -1.19
USP3-208ENST00000558285 C3orf36Q3SXR2 165 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms