RNA–Protein interactions for RNA: ENST00000558013.5

LDLR-207, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLR, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-207ENST00000558013 C7orf50Q9BRJ6 194 aaKnown RBP11.66□□□□□ -0.54
LDLR-207ENST00000558013 ACTR6Q9GZN1 396 aa11.66□□□□□ -0.54
LDLR-207ENST00000558013 LANCL2Q9NS86 450 aa11.66□□□□□ -0.54
LDLR-207ENST00000558013 TAS2R5Q9NYW4 299 aa11.66□□□□□ -0.54
LDLR-207ENST00000558013 C2orf72A6NCS6 295 aa11.66□□□□□ -0.54
LDLR-207ENST00000558013 ZNF749O43361 778 aa11.66□□□□□ -0.54
LDLR-207ENST00000558013 TACSTD2P09758 323 aa11.66□□□□□ -0.54
LDLR-207ENST00000558013 HOXD11P31277 338 aaPredicted RBP11.66□□□□□ -0.54
LDLR-207ENST00000558013 CCKBRP32239 447 aa11.66□□□□□ -0.54
LDLR-207ENST00000558013 HSD17B7P56937 341 aa11.66□□□□□ -0.54
LDLR-207ENST00000558013 PCGF3Q3KNV8 242 aa11.66□□□□□ -0.54
LDLR-207ENST00000558013 OR5M1Q8NGP8 315 aa11.66□□□□□ -0.54
LDLR-207ENST00000558013 SUN5Q8TC36 379 aa11.66□□□□□ -0.54
LDLR-207ENST00000558013 TCTN2Q96GX1 697 aa11.66□□□□□ -0.54
LDLR-207ENST00000558013 SLC38A3Q99624 504 aa11.66□□□□□ -0.54
LDLR-207ENST00000558013 OR11A1Q9GZK7 315 aa11.66□□□□□ -0.54
LDLR-207ENST00000558013 NPTNQ9Y639 398 aa11.66□□□□□ -0.54
LDLR-207ENST00000558013 TRBV5-5A0A0J9YX44 114 aa11.65□□□□□ -0.54
LDLR-207ENST00000558013 A0A1B0GVI7 797 aa11.65□□□□□ -0.54
LDLR-207ENST00000558013 IFI6P09912 130 aa11.65□□□□□ -0.54
LDLR-207ENST00000558013 PNMTP11086 282 aa11.65□□□□□ -0.54
LDLR-207ENST00000558013 SLC25A1P53007 311 aa11.65□□□□□ -0.54
LDLR-207ENST00000558013 ARPC4P59998 168 aa11.65□□□□□ -0.54
LDLR-207ENST00000558013 FAM69AQ5T7M9 428 aa11.65□□□□□ -0.54
LDLR-207ENST00000558013 BAIAP2L2Q6UXY1 529 aa11.65□□□□□ -0.54
LDLR-207ENST00000558013 GLDNQ6ZMI3 551 aaPredicted RBP11.65□□□□□ -0.54
LDLR-207ENST00000558013 RTTNQ86VV8 2226 aa11.65□□□□□ -0.54
LDLR-207ENST00000558013 MEIOBQ8N635 442 aa11.65□□□□□ -0.54
LDLR-207ENST00000558013 SLC19A3Q9BZV2 496 aa11.65□□□□□ -0.54
LDLR-207ENST00000558013 CHST6Q9GZX3 395 aa11.65□□□□□ -0.54
LDLR-207ENST00000558013 ZMAT3Q9HA38 289 aaKnown RBP11.65□□□□□ -0.54
LDLR-207ENST00000558013 ELOVL3Q9HB03 270 aa11.65□□□□□ -0.54
LDLR-207ENST00000558013 MRPL39Q9NYK5 338 aaKnown RBP11.65□□□□□ -0.54
LDLR-207ENST00000558013 LINC00862A6NCI5 91 aa11.65□□□□□ -0.54
LDLR-207ENST00000558013 POM121CA8CG34 1229 aa11.65□□□□□ -0.54
LDLR-207ENST00000558013 SMAD9O15198 467 aaKnown RBP11.65□□□□□ -0.54
LDLR-207ENST00000558013 TGM6O95932 706 aa11.65□□□□□ -0.54
LDLR-207ENST00000558013 CSRP1P21291 193 aaKnown RBP11.65□□□□□ -0.54
LDLR-207ENST00000558013 NR0B1P51843 470 aaKnown RBP11.65□□□□□ -0.54
LDLR-207ENST00000558013 ISXQ2M1V0 245 aa11.65□□□□□ -0.54
LDLR-207ENST00000558013 COL28A1Q2UY09 1125 aa11.65□□□□□ -0.54
LDLR-207ENST00000558013 SLC6A19Q695T7 634 aa11.65□□□□□ -0.54
LDLR-207ENST00000558013 TMEM205Q6UW68 189 aa11.65□□□□□ -0.54
LDLR-207ENST00000558013 COMMD7Q86VX2 200 aa11.65□□□□□ -0.54
LDLR-207ENST00000558013 ELMOD3Q96FG2 381 aa11.65□□□□□ -0.54
LDLR-207ENST00000558013 NUDT9Q9BW91 350 aa11.65□□□□□ -0.54
LDLR-207ENST00000558013 CLEC4MQ9H2X3 399 aaPredicted RBP11.65□□□□□ -0.54
LDLR-207ENST00000558013 SPAG17Q6Q759 2223 aa11.65□□□□□ -0.54
LDLR-207ENST00000558013 M0R233 179 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 GLSO94925 669 aaPredicted RBP11.64□□□□□ -0.55
LDLR-207ENST00000558013 IL33O95760 270 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 PDGFAP04085 211 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 RLN1P04808 185 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 PSMA6P60900 246 aaKnown RBP11.64□□□□□ -0.55
LDLR-207ENST00000558013 SIX5Q8N196 739 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 OR4C16Q8NGL9 310 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 TSEN15Q8WW01 171 aaKnown RBP11.64□□□□□ -0.55
LDLR-207ENST00000558013 MSANTD3Q96H12 275 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 SLITRK2Q9H156 845 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 TRAV18A0A075B6X5 111 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 A0A1B0GUH1 482 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 A0A1W2PPC4 97 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 HIST1H2ABP04908 130 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 GUSBP08236 651 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 IL11P20809 199 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 H2BFSP57053 126 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 MFGE8Q08431 387 aaPredicted RBP11.64□□□□□ -0.55
LDLR-207ENST00000558013 MELKQ14680 651 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 EEF1A1P5Q5VTE0 462 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 METTL11BQ5VVY1 283 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 HIST3H2AQ7L7L0 130 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 WDFY1Q8IWB7 410 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 PHYHIPQ92561 330 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 HIST1H2ACQ93077 130 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 MED30Q96HR3 178 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 INTS14Q96SY0 518 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 PRODH2Q9UF12 536 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 C2CD4DB7Z1M9 353 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 ACOT7O00154 380 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 SLC16A7O60669 478 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 ECDO95905 644 aaPredicted RBP11.64□□□□□ -0.55
LDLR-207ENST00000558013 HLA-DOBP13765 273 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 PPICP45877 212 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 POU3F4P49335 361 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 SMUG1Q53HV7 270 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.64□□□□□ -0.55
LDLR-207ENST00000558013 C1orf189Q5VU69 101 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 OR7E24Q6IFN5 339 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 ANGPTL6Q8NI99 470 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 ADIPOR1Q96A54 375 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 MRPL48Q96GC5 212 aaKnown RBP11.64□□□□□ -0.55
LDLR-207ENST00000558013 SFXN2Q96NB2 322 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 B9D1Q9UPM9 204 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 MOKQ9UQ07 419 aa11.64□□□□□ -0.55
LDLR-207ENST00000558013 KIF26BQ2KJY2 2108 aa11.63□□□□□ -0.55
LDLR-207ENST00000558013 C10orf142B7Z368 130 aa11.63□□□□□ -0.55
LDLR-207ENST00000558013 CDC40O60508 579 aaKnown RBP eCLIP11.63□□□□□ -0.55
LDLR-207ENST00000558013 DDAH2O95865 285 aa11.63□□□□□ -0.55
LDLR-207ENST00000558013 SPARCP09486 303 aa11.63□□□□□ -0.55
LDLR-207ENST00000558013 RAB40ALP0C0E4 278 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms