RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 DLL3Q9NYJ7 618 aa6.6□□□□□ -1.35
SPG11-204ENST00000557866 VSX1Q9NZR4 365 aaPredicted RBP6.6□□□□□ -1.35
SPG11-204ENST00000557866 B3GAT1Q9P2W7 334 aa6.6□□□□□ -1.35
SPG11-204ENST00000557866 GRHPRQ9UBQ7 328 aa6.6□□□□□ -1.35
SPG11-204ENST00000557866 STUB1Q9UNE7 303 aa6.6□□□□□ -1.35
SPG11-204ENST00000557866 RALGAPA1Q6GYQ0 2036 aa6.6□□□□□ -1.35
SPG11-204ENST00000557866 FREM2Q5SZK8 3169 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 PCNX3Q9H6A9 2034 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 A0A1W2PNV4 684 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 SLC22A23A1A5C7 686 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 OR2M5A3KFT3 312 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 PRSS37A4D1T9 235 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 TVP23AA6NH52 213 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 METTL15A6NJ78 407 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 J3QLW9 94 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 RAMP1O60894 148 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 CLPXO76031 633 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 NEURL1O76050 574 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 AKR7A3O95154 331 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 OR6A2O95222 327 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 RENP00797 406 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 P04436 131 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 RFPL3SP0C7P2 107 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 OR2T7P0C7T2 308 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 CEACAM1P13688 526 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 ZNF19P17023 458 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 WT1P19544 449 aaPredicted RBP6.59□□□□□ -1.35
SPG11-204ENST00000557866 SFTPDP35247 375 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 ACVR1BP36896 505 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 SERPINB10P48595 397 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 CYB561P49447 251 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 NOVA1P51513 510 aaKnown RBP6.59□□□□□ -1.35
SPG11-204ENST00000557866 OR2B6P58173 313 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 GPR85P60893 370 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 FABP5Q01469 135 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 PUDPQ08623 228 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 AIMP2Q13155 320 aaKnown RBP6.59□□□□□ -1.35
SPG11-204ENST00000557866 SELENBP1Q13228 472 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 IKZF1Q13422 519 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 ETFDHQ16134 617 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 ZNF239Q16600 458 aaKnown RBP6.59□□□□□ -1.35
SPG11-204ENST00000557866 ZNF684Q5T5D7 378 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 LCN1P1Q5VSP4 162 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 OTPQ5XKR4 325 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 SPINK14Q6IE38 97 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 C3orf33Q6P1S2 294 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 TUBA3EQ6PEY2 450 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 TMPRSS11AQ6ZMR5 421 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 USP43Q70EL4 1123 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 YRDCQ86U90 279 aaKnown RBP6.59□□□□□ -1.35
SPG11-204ENST00000557866 VASH2Q86V25 355 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 TIGD4Q8IY51 512 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 POMGNT2Q8NAT1 580 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 OR6K6Q8NGW6 343 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 OR2T27Q8NH04 317 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 ASB10Q8WXI3 467 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 UFD1Q92890 307 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 TMEM203Q969S6 136 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 ZHX1-C8orf76Q96EF9 292 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 TXNDC15Q96J42 360 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 C4orf36Q96KX1 117 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 C5orf34Q96MH7 638 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 SIGLEC12Q96PQ1 595 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 OR5B2Q96R09 309 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 SNX18Q96RF0 628 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 HES7Q9BYE0 225 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 TTTY10Q9BZA0 68 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 NUAK2Q9H093 628 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 IRF2BPLQ9H1B7 796 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 SYT4Q9H2B2 425 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 PTGES2Q9H7Z7 377 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 FANCFQ9NPI8 374 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 SERINC1Q9NRX5 453 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 SACM1LQ9NTJ5 587 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 BABAM2Q9NXR7 383 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 PLA2G3Q9NZ20 509 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 STMN3Q9NZ72 180 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 KLHL13Q9P2N7 655 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 B9D1Q9UPM9 204 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 MOKQ9UQ07 419 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 KLHDC2Q9Y2U9 406 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 NOX1Q9Y5S8 564 aa6.59□□□□□ -1.35
SPG11-204ENST00000557866 EXPH5Q8NEV8 1989 aa6.58□□□□□ -1.36
SPG11-204ENST00000557866 IGLV1-36A0A0B4J1U3 117 aa6.58□□□□□ -1.36
SPG11-204ENST00000557866 IGKV1D-43A0A0B4J1Z2 117 aa6.58□□□□□ -1.36
SPG11-204ENST00000557866 A0A1W2PRG6 482 aa6.58□□□□□ -1.36
SPG11-204ENST00000557866 NPIPB13A6NJU9 1138 aa6.58□□□□□ -1.36
SPG11-204ENST00000557866 NPIPB4C9JG80 1138 aa6.58□□□□□ -1.36
SPG11-204ENST00000557866 NKX2-8O15522 239 aa6.58□□□□□ -1.36
SPG11-204ENST00000557866 CBR3O75828 277 aa6.58□□□□□ -1.36
SPG11-204ENST00000557866 WDPCPO95876 746 aa6.58□□□□□ -1.36
SPG11-204ENST00000557866 MT-ND5P03915 603 aa6.58□□□□□ -1.36
SPG11-204ENST00000557866 IFNGR1P15260 489 aa6.58□□□□□ -1.36
SPG11-204ENST00000557866 CTLA4P16410 223 aa6.58□□□□□ -1.36
SPG11-204ENST00000557866 ZNF17P17021 662 aa6.58□□□□□ -1.36
SPG11-204ENST00000557866 CELP19835 753 aa6.58□□□□□ -1.36
SPG11-204ENST00000557866 CNR1P21554 472 aa6.58□□□□□ -1.36
SPG11-204ENST00000557866 ITGA3P26006 1051 aa6.58□□□□□ -1.36
SPG11-204ENST00000557866 SRD5A2P31213 254 aa6.58□□□□□ -1.36
SPG11-204ENST00000557866 GABRA5P31644 462 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms