RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 CALB1P05937 261 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 ANXA4P09525 319 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 H2AFZP0C0S5 128 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 STAG3L2P0CL84 134 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 PPIAL4FP0DN26 164 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 MBL2P11226 248 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 CYP11B1P15538 503 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 NQO1P15559 274 aaKnown RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 MAGP20916 626 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 PTNP21246 168 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 GJB2P29033 226 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 ID1P41134 155 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 GSK3BP49841 420 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 OR2B6P58173 313 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 PSME3P61289 254 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 RAB11AP62491 216 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 TGM3Q08188 693 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 ZP4Q12836 540 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 ASAH1Q13510 395 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 SELPLGQ14242 412 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 GPR176Q14439 515 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 P2RY14Q15391 338 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 TGIF1Q15583 401 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 RAB11BQ15907 218 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 MICBQ29980 383 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 TMEM249Q2WGJ8 235 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 Q5BKY6 102 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 RABGAP1LQ5R372 815 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 MUC21Q5SSG8 566 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 UTF1Q5T230 341 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 SYT6Q5T7P8 510 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 GPR107Q5VW38 600 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 NCR3LG1Q68D85 454 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 PYHIN1Q6K0P9 492 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 ANKRD26P1Q6NSI1 321 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 CDC42EP5Q6NZY7 148 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 ZNF343Q6P1L6 599 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 CYHR1Q6ZMK1 362 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 MBOAT1Q6ZNC8 495 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 FAM92BQ6ZTR7 304 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 PID1Q7Z2X4 250 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 SLC26A11Q86WA9 606 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 FAM58AQ8N1B3 248 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 KBTBD8Q8NFY9 601 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 C22orf15Q8WYQ4 148 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 ESAMQ96AP7 390 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 TAMM41Q96BW9 452 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 COQ2Q96H96 371 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 PCED1BQ96HM7 432 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 DOK1Q99704 481 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 EBNA1BP2Q99848 306 aaKnown RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 FAM173AQ9BQD7 235 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 CENPKQ9BS16 269 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 MROQ9BYG7 248 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 PRRG3Q9BZD7 231 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 TRIM9Q9C026 710 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 MFFQ9GZY8 342 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 PIGUQ9H490 435 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 KIR3DX1Q9H7L2 352 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 DCLRE1BQ9H816 532 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 JPT2Q9H910 190 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 NMNAT1Q9HAN9 279 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 APMAPQ9HDC9 416 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 IFT46Q9NQC8 304 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 C20orf96Q9NUD7 363 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 TREM2Q9NZC2 230 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 ADA2Q9NZK5 511 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 CNOT2Q9NZN8 540 aaKnown RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 MYEF2Q9P2K5 600 aaKnown RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 MIOXQ9UGB7 285 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 MRTO4Q9UKD2 239 aaKnown RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 CEMIPQ8WUJ3 1361 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 GRIN2AQ12879 1464 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 PLA2R1Q13018 1463 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 KDM6AO15550 1401 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 USP42Q9H9J4 1324 aaKnown RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 ADAMTSL3P82987 1691 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 IGHV3OR16-12A0A075B7B8 117 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 GNG14A0A1W2PPG7 69 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 CFAP73A6NFT4 308 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 MGAT4DA6NG13 374 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 A6NIZ1 184 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 PDZK1P1A8MUH7 402 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 RNASEK-C17orf49H0YIS7 233 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 PDXKO00764 312 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 PRRG1O14668 218 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 UGT1A9O60656 530 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 VPS26AO75436 327 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 OR7A10O76100 309 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 VAPBO95292 243 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 ACTL6AO96019 429 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 CCNE2O96020 404 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 RENP00797 406 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 IFNA16P05015 189 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 UGT2B4P06133 528 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 PAEPP09466 180 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 THRAP10827 490 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 DTYMKP23919 212 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 S100PP25815 95 aa1.35□□□□□ -2.19
HIF1A-212ENST00000557538 SLCO1A2P46721 670 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms