RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 FOXG1P55316 489 aaPredicted RBP7.29□□□□□ -1.24
PSEN1-223ENST00000557511 CTXN1P60606 82 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 LGALS3BPQ08380 585 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 DOC2BQ14184 412 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 ZBED5Q49AG3 693 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 LCN8Q6JVE9 175 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 ADAM5Q6NVV9 412 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 TMEM53Q6P2H8 277 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 TBPL2Q6SJ96 375 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 C22orf34Q6ZV56 151 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 TMPRSS11FQ6ZWK6 438 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 PIWIL3Q7Z3Z3 882 aaKnown RBP7.29□□□□□ -1.24
PSEN1-223ENST00000557511 DPPA2Q7Z7J5 298 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 TMEM123Q8N131 208 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 FBXL14Q8N1E6 418 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 ZNF611Q8N823 705 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 NOXO1Q8NFA2 376 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 IL17RDQ8NFM7 739 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 OR4K5Q8NGD3 323 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 MOSPD2Q8NHP6 518 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 SLC7A13Q8TCU3 470 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 NRGNQ92686 78 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 BCL2L2Q92843 193 aaPredicted RBP7.29□□□□□ -1.24
PSEN1-223ENST00000557511 TRMT61AQ96FX7 289 aaKnown RBP7.29□□□□□ -1.24
PSEN1-223ENST00000557511 FAM46AQ96IP4 442 aaKnown RBP7.29□□□□□ -1.24
PSEN1-223ENST00000557511 C7orf34Q96L11 122 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 SLC38A2Q96QD8 506 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 ALPK1Q96QP1 1244 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 TXNIPQ9H3M7 391 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 RNF121Q9H920 327 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 SRA1Q9HD15 236 aaKnown RBP7.29□□□□□ -1.24
PSEN1-223ENST00000557511 BEX4Q9NWD9 120 aaPredicted RBP7.29□□□□□ -1.24
PSEN1-223ENST00000557511 CISD1Q9NZ45 108 aaKnown RBP7.29□□□□□ -1.24
PSEN1-223ENST00000557511 SPEF1Q9Y4P9 236 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 CACNA1DQ01668 2161 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 CENPEQ02224 2701 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 DPRXA6NFQ7 191 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 UNC119BA6NIH7 251 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 AQP12BA6NM10 295 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 TRMUO75648 421 aaKnown RBP7.28□□□□□ -1.24
PSEN1-223ENST00000557511 CCNB2O95067 398 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 PRSS23O95084 383 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 ATE1O95260 518 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 PTHP01270 115 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 QDPRP09417 244 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 OR8G3PP0DMU2 310 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 RAP2AP10114 183 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 CBR1P16152 277 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 MAKP20794 623 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 ATP6V1B2P21281 511 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 FABP6P51161 128 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 ARHGDIAP52565 204 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 RPL27P61353 136 aaKnown RBP7.28□□□□□ -1.24
PSEN1-223ENST00000557511 RPS4XP62701 263 aaKnown RBP7.28□□□□□ -1.24
PSEN1-223ENST00000557511 PLP2Q04941 152 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 NPRL3Q12980 569 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 FLOT2Q14254 428 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 GSG1Q2KHT4 349 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 DEFB113Q30KQ7 82 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 SLC36A2Q495M3 483 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 ZNF672Q499Z4 452 aaPredicted RBP7.28□□□□□ -1.24
PSEN1-223ENST00000557511 THEM4Q5T1C6 240 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 AGAP6Q5VW22 663 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 SLC16A14Q7RTX9 510 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 IGFN1Q86VF2 1251 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 SPATA24Q86W54 205 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 LSRQ86X29 649 aaPredicted RBP7.28□□□□□ -1.24
PSEN1-223ENST00000557511 AQP12AQ8IXF9 295 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 FAM86B1Q8N7N1 296 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 WDR31Q8NA23 367 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 SYT14Q8NB59 555 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 KBTBD8Q8NFY9 601 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 OR13C2Q8NGS9 318 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 GNPDA2Q8TDQ7 276 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 SMAP2Q8WU79 429 aaPredicted RBP7.28□□□□□ -1.24
PSEN1-223ENST00000557511 ASB10Q8WXI3 467 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 TMEM54Q969K7 222 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 MBD6Q96DN6 1003 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 BOD1Q96IK1 185 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 RSRC1Q96IZ7 334 aaKnown RBP7.28□□□□□ -1.24
PSEN1-223ENST00000557511 ZNF570Q96NI8 536 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 TNFRSF13CQ96RJ3 184 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 CITED4Q96RK1 184 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 FOXC2Q99958 501 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 TMEM204Q9BSN7 226 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 ALG12Q9BV10 488 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 LRMDAQ9H2I8 198 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 LIME1Q9H400 295 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 DENND2DQ9H6A0 471 aaPredicted RBP7.28□□□□□ -1.24
PSEN1-223ENST00000557511 REEP1Q9H902 201 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 CCNB1IP1Q9NPC3 277 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 MAN2C1Q9NTJ4 1040 aa7.28□□□□□ -1.24
PSEN1-223ENST00000557511 ZNF346Q9UL40 294 aaKnown RBP7.28□□□□□ -1.24
PSEN1-223ENST00000557511 TRBV4-1A0A0J9YWV2 114 aa7.27□□□□□ -1.25
PSEN1-223ENST00000557511 IQCMA0A1B0GVH7 501 aa7.27□□□□□ -1.25
PSEN1-223ENST00000557511 DHRS12A0PJE2 317 aa7.27□□□□□ -1.25
PSEN1-223ENST00000557511 SH3PXD2BA1X283 911 aa7.27□□□□□ -1.25
PSEN1-223ENST00000557511 DEAF1O75398 565 aaPredicted RBP7.27□□□□□ -1.25
PSEN1-223ENST00000557511 CIB2O75838 187 aa7.27□□□□□ -1.25
PSEN1-223ENST00000557511 SEC14L2O76054 403 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms