RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 RENP00797 406 aa14.79□□□□□ -0.04
SHMT2-232ENST00000557487 PTHLHP12272 177 aa14.79□□□□□ -0.04
SHMT2-232ENST00000557487 ALOX5APP20292 161 aa14.79□□□□□ -0.04
SHMT2-232ENST00000557487 MAGEB1P43366 347 aa14.79□□□□□ -0.04
SHMT2-232ENST00000557487 TNFRSF4P43489 277 aa14.79□□□□□ -0.04
SHMT2-232ENST00000557487 TAS2R19P59542 299 aa14.79□□□□□ -0.04
SHMT2-232ENST00000557487 ZNF345Q14585 488 aa14.79□□□□□ -0.04
SHMT2-232ENST00000557487 RAB11BQ15907 218 aa14.79□□□□□ -0.04
SHMT2-232ENST00000557487 MAMSTRQ6ZN01 415 aa14.79□□□□□ -0.04
SHMT2-232ENST00000557487 YAF2Q8IY57 180 aa14.79□□□□□ -0.04
SHMT2-232ENST00000557487 TMEM229BQ8NBD8 167 aa14.79□□□□□ -0.04
SHMT2-232ENST00000557487 CLEC1AQ8NC01 280 aa14.79□□□□□ -0.04
SHMT2-232ENST00000557487 LSM14AQ8ND56 463 aaKnown RBP14.79□□□□□ -0.04
SHMT2-232ENST00000557487 RCBTB1Q8NDN9 531 aa14.79□□□□□ -0.04
SHMT2-232ENST00000557487 PXT1Q8NFP0 134 aa14.79□□□□□ -0.04
SHMT2-232ENST00000557487 TMEM106AQ96A25 262 aa14.79□□□□□ -0.04
SHMT2-232ENST00000557487 C1QTNF6Q9BXI9 259 aa14.79□□□□□ -0.04
SHMT2-232ENST00000557487 IKZF2Q9UKS7 526 aa14.79□□□□□ -0.04
SHMT2-232ENST00000557487 MRPS33Q9Y291 106 aaKnown RBP14.79□□□□□ -0.04
SHMT2-232ENST00000557487 GOLGA4Q13439 2230 aaKnown RBP14.79□□□□□ -0.04
SHMT2-232ENST00000557487 NUP210LQ5VU65 1888 aa14.79□□□□□ -0.04
SHMT2-232ENST00000557487 IGKV1D-42A0A075B6H8 117 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 TRAV8-7A0A075B6U6 113 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 A0A0A6YYH2 397 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 A6NJ64 397 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 SLC17A2O00624 439 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 SCAMP1O15126 338 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 FOXS1O43638 330 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 CDC123O75794 336 aaPredicted RBP14.78□□□□□ -0.04
SHMT2-232ENST00000557487 CD8AP01732 235 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 MAS1P04201 325 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 TMIGD3P0DMS9 266 aaPredicted RBP14.78□□□□□ -0.04
SHMT2-232ENST00000557487 GRPRP30550 384 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 AQP2P41181 271 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 CENPAP49450 140 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 CTXN1P60606 82 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 IGLV3-21P80748 117 aaPredicted RBP14.78□□□□□ -0.04
SHMT2-232ENST00000557487 DLX2Q07687 328 aaPredicted RBP14.78□□□□□ -0.04
SHMT2-232ENST00000557487 FAM53BQ14153 422 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 GPR18Q14330 331 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 C4orf46Q504U0 113 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 STEAP1BQ6NZ63 245 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 TMEM17Q86X19 198 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 OR4N2Q8NGD1 307 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 OR51S1Q8NGJ8 323 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 GPX8Q8TED1 209 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 PHYHIPLQ96FC7 376 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 CCDC3Q9BQI4 270 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 B3GNT4Q9C0J1 378 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 CAPN10Q9HC96 672 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 GRHPRQ9UBQ7 328 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 ERVK-19Q9WJR5 959 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 KLHDC2Q9Y2U9 406 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 MPTX1A8MV57 137 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 SIX6O95475 246 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 NKAIN2Q5VXU1 208 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 NPSR1Q6W5P4 371 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 DGAT2L6Q6ZPD8 337 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 ATG4DQ86TL0 474 aaPredicted RBP14.78□□□□□ -0.04
SHMT2-232ENST00000557487 CCDC36Q8IYA8 594 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 C12orf45Q8N5I9 185 aaPredicted RBP14.78□□□□□ -0.04
SHMT2-232ENST00000557487 ASB17Q8WXJ9 295 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 C4orf45Q96LM5 186 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 SEMA4CQ9C0C4 833 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 IFT46Q9NQC8 304 aa14.78□□□□□ -0.04
SHMT2-232ENST00000557487 MYO7AQ13402 2215 aa14.77□□□□□ -0.04
SHMT2-232ENST00000557487 TRAV18A0A075B6X5 111 aa14.77□□□□□ -0.04
SHMT2-232ENST00000557487 BLOC1S5-TXNDC5H3BN57 136 aa14.77□□□□□ -0.04
SHMT2-232ENST00000557487 OR2F2O95006 317 aa14.77□□□□□ -0.04
SHMT2-232ENST00000557487 WNT11O96014 354 aa14.77□□□□□ -0.04
SHMT2-232ENST00000557487 ASAH2BP0C7U1 165 aa14.77□□□□□ -0.04
SHMT2-232ENST00000557487 RAB3AP20336 220 aa14.77□□□□□ -0.04
SHMT2-232ENST00000557487 POU3F4P49335 361 aa14.77□□□□□ -0.04
SHMT2-232ENST00000557487 OR2F1Q13607 317 aa14.77□□□□□ -0.04
SHMT2-232ENST00000557487 C2orf68Q2NKX9 166 aa14.77□□□□□ -0.04
SHMT2-232ENST00000557487 KLHL26Q53HC5 615 aa14.77□□□□□ -0.04
SHMT2-232ENST00000557487 EEF1A1P5Q5VTE0 462 aa14.77□□□□□ -0.04
SHMT2-232ENST00000557487 TANGO2Q6ICL3 276 aa14.77□□□□□ -0.04
SHMT2-232ENST00000557487 CFAP77Q6ZQR2 320 aa14.77□□□□□ -0.04
SHMT2-232ENST00000557487 C12orf76Q8N812 135 aaPredicted RBP14.77□□□□□ -0.04
SHMT2-232ENST00000557487 OR10Z1Q8NGY1 313 aa14.77□□□□□ -0.04
SHMT2-232ENST00000557487 FAM3DQ96BQ1 224 aa14.77□□□□□ -0.04
SHMT2-232ENST00000557487 MRPS24Q96EL2 167 aaKnown RBP14.77□□□□□ -0.04
SHMT2-232ENST00000557487 WDR89Q96FK6 387 aaPredicted RBP14.77□□□□□ -0.04
SHMT2-232ENST00000557487 SIPA1Q96FS4 1042 aa14.77□□□□□ -0.04
SHMT2-232ENST00000557487 INTS14Q96SY0 518 aa14.77□□□□□ -0.04
SHMT2-232ENST00000557487 SLC38A3Q99624 504 aa14.77□□□□□ -0.04
SHMT2-232ENST00000557487 SFXN1Q9H9B4 322 aa14.77□□□□□ -0.04
SHMT2-232ENST00000557487 MMP25Q9NPA2 562 aa14.77□□□□□ -0.04
SHMT2-232ENST00000557487 DZANK1Q9NVP4 752 aa14.77□□□□□ -0.04
SHMT2-232ENST00000557487 RASL12Q9NYN1 266 aa14.77□□□□□ -0.04
SHMT2-232ENST00000557487 GPN3Q9UHW5 284 aaPredicted RBP14.77□□□□□ -0.04
SHMT2-232ENST00000557487 POM121BA6NF01 834 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 POM121CA8CG34 1229 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 ABCD4O14678 606 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 NDUFA2O43678 99 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 SLC25A4P12235 298 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 RNH1P13489 461 aaKnown RBP14.76□□□□□ -0.05
SHMT2-232ENST00000557487 SORDQ00796 357 aa14.76□□□□□ -0.05
SHMT2-232ENST00000557487 TFF2Q03403 129 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms