RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 CLDND2Q8NHS1 167 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 SLC47A1Q96FL8 570 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 MAELQ96JY0 434 aaKnown RBP7.43□□□□□ -1.22
VRK1-206ENST00000557222 SPATA5L1Q9BVQ7 753 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 PLA2G12AQ9BZM1 189 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 METTL17Q9H7H0 456 aaPredicted RBP7.43□□□□□ -1.22
VRK1-206ENST00000557222 SDR39U1Q9NRG7 319 aaPredicted RBP7.43□□□□□ -1.22
VRK1-206ENST00000557222 SLC6A13Q9NSD5 602 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 NKIRAS2Q9NYR9 191 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 KLHL14Q9P2G3 628 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 GPR160Q9UJ42 338 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 POFUT2Q9Y2G5 429 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 GMEB1Q9Y692 573 aa7.43□□□□□ -1.22
VRK1-206ENST00000557222 IGKV1D-42A0A075B6H8 117 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 A0A087WUJ7 227 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 A0A1B0GWA3 101 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 ZNF726A6NNF4 738 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 FAM157AC9JC47 383 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 TRIM77I1YAP6 450 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 M0R3G1 203 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 MGRN1O60291 552 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 SNNO75324 88 aaPredicted RBP7.42□□□□□ -1.22
VRK1-206ENST00000557222 RAB36O95755 333 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 HLA-HP01893 362 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 SERPINA5P05154 406 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 GAAP10253 952 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 CD79AP11912 226 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 COL8A2P25067 703 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 EPHA3P29320 983 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 SELENOVP59797 346 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 HILS1P60008 231 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 LMO4P61968 165 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 RAB1AP62820 205 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 MYBPC1Q00872 1141 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 GALK2Q01415 458 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 CCNIQ14094 377 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 PCGF3Q3KNV8 242 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 ALG10BQ5I7T1 473 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 FAM209AQ5JX71 171 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 GKAP1Q5VSY0 366 aaPredicted RBP7.42□□□□□ -1.22
VRK1-206ENST00000557222 SHQ1Q6PI26 577 aaKnown RBP7.42□□□□□ -1.22
VRK1-206ENST00000557222 ZNF813Q6ZN06 617 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 RINLQ6ZS11 566 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 PXKQ7Z7A4 578 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 KRT73Q86Y46 540 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 MGARPQ8TDB4 240 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 GTF2H4Q92759 462 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 FOXB1Q99853 325 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 RBM4Q9BWF3 364 aaKnown RBP7.42□□□□□ -1.22
VRK1-206ENST00000557222 TPK1Q9H3S4 243 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 C1orf198Q9H425 327 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 SLC52A3Q9NQ40 469 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 MRPL39Q9NYK5 338 aaKnown RBP7.42□□□□□ -1.22
VRK1-206ENST00000557222 SELENONQ9NZV5 590 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 SEC14L4Q9UDX3 406 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 TESQ9UGI8 421 aaKnown RBP7.42□□□□□ -1.22
VRK1-206ENST00000557222 SLC7A8Q9UHI5 535 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 PCDHB10Q9UN67 800 aa7.42□□□□□ -1.22
VRK1-206ENST00000557222 PRORSD1PA6NEY8 169 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 C5orf58C9J3I9 102 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 LYNX1G3V0Z9 82 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 J3QLI3 93 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 CLIC1O00299 241 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 PSPNO60542 156 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 RP2O75695 350 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 PNPP00491 289 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 MT-ATP6P00846 226 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 BGLAPP02818 100 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 LYNX1P0DP58 116 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 PPIBP23284 216 aaKnown RBP7.41□□□□□ -1.22
VRK1-206ENST00000557222 GATA3P23771 443 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 MRPL19P49406 292 aaKnown RBP7.41□□□□□ -1.22
VRK1-206ENST00000557222 POLR2JP52435 117 aaKnown RBP7.41□□□□□ -1.22
VRK1-206ENST00000557222 PCBP3P57721 371 aaKnown RBP7.41□□□□□ -1.22
VRK1-206ENST00000557222 PUDPQ08623 228 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 CAMK2DQ13557 499 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 MOGQ16653 247 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 NRN1LQ496H8 165 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 PHYHD1Q5SRE7 291 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 HHATQ5VTY9 493 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 REEP3Q6NUK4 255 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 ACSM5Q6NUN0 579 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 C1QL4Q86Z23 238 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 GCDHQ92947 438 aaPredicted RBP7.41□□□□□ -1.22
VRK1-206ENST00000557222 LRRC37BQ96QE4 947 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 TMEM43Q9BTV4 400 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 ULBP2Q9BZM5 246 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 PAIP1Q9H074 479 aaKnown RBP7.41□□□□□ -1.22
VRK1-206ENST00000557222 WDR55Q9H6Y2 383 aaPredicted RBP7.41□□□□□ -1.22
VRK1-206ENST00000557222 TMEM27Q9HBJ8 222 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 KCNK9Q9NPC2 374 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 ZNF275Q9NSD4 429 aaPredicted RBP7.41□□□□□ -1.22
VRK1-206ENST00000557222 SLCO1C1Q9NYB5 712 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 ZNF224Q9NZL3 707 aa7.41□□□□□ -1.22
VRK1-206ENST00000557222 IGLV3-9A0A075B6K5 115 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 A0A0B4J2E0 115 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 A0A1B0GX12 115 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 TMEM82A0PJX8 343 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 NOTOA8MTQ0 251 aa7.4□□□□□ -1.22
VRK1-206ENST00000557222 C17orf100A8MU93 164 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms