RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 IGFN1Q86VF2 1251 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 ARIH2OSQ8N7S6 290 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 IL17RDQ8NFM7 739 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 KBTBD8Q8NFY9 601 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 GNPDA2Q8TDQ7 276 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 NANOS1Q8WY41 292 aaKnown RBP9.32□□□□□ -0.92
LINC00239-201ENST00000556973 HDAC2Q92769 488 aaKnown RBP9.32□□□□□ -0.92
LINC00239-201ENST00000556973 SLC38A2Q96QD8 506 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 KCNK17Q96T54 332 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 CCL19Q99731 98 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 ALG12Q9BV10 488 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 CADM1Q9BY67 442 aaKnown RBP9.32□□□□□ -0.92
LINC00239-201ENST00000556973 CXXC4Q9H2H0 198 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 MMADHCQ9H3L0 296 aaPredicted RBP9.32□□□□□ -0.92
LINC00239-201ENST00000556973 DENND2DQ9H6A0 471 aaPredicted RBP9.32□□□□□ -0.92
LINC00239-201ENST00000556973 SMURF2Q9HAU4 748 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 B3GNT2Q9NY97 397 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 SIGLEC7Q9Y286 467 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 LYVE1Q9Y5Y7 322 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 HRNRQ86YZ3 2850 aaPredicted RBP9.31□□□□□ -0.92
LINC00239-201ENST00000556973 HEATR1Q9H583 2144 aaKnown RBP9.31□□□□□ -0.92
LINC00239-201ENST00000556973 ARHGEF9O43307 516 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 AHCYL1O43865 530 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 UBL3O95164 117 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 FARS2O95363 451 aaKnown RBP9.31□□□□□ -0.92
LINC00239-201ENST00000556973 IGLV1-44P01699 117 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 CRYAAP02489 173 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 CD14P08571 375 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 B4GALT1P15291 398 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 ZNF26P17031 533 aaPredicted RBP9.31□□□□□ -0.92
LINC00239-201ENST00000556973 NPR2P20594 1047 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 FPR3P25089 353 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 CAPZA2P47755 286 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 RAB1AP62820 205 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 ERVK-25P63136 954 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 TUBA1BP68363 451 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 TUBA4AP68366 448 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 MYBPC1Q00872 1141 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 TSPAN31Q12999 210 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 TOP3AQ13472 1001 aaPredicted RBP9.31□□□□□ -0.92
LINC00239-201ENST00000556973 GK3PQ14409 553 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 GSG1Q2KHT4 349 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 C10orf128Q5T292 105 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 OR2T5Q6IEZ7 315 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 SMARCD3Q6STE5 483 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 TUBA1AQ71U36 451 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 DPPA2Q7Z7J5 298 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 SKA3Q8IX90 412 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 SLC22A24Q8N4F4 322 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 OR2T29Q8NH02 315 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 ZNF519Q8TB69 540 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 SMAP2Q8WU79 429 aaPredicted RBP9.31□□□□□ -0.92
LINC00239-201ENST00000556973 TMEM171Q8WVE6 324 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 NEUROG1Q92886 237 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 RSRC1Q96IZ7 334 aaKnown RBP9.31□□□□□ -0.92
LINC00239-201ENST00000556973 TSPAN32Q96QS1 320 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 GPX7Q96SL4 187 aaPredicted RBP9.31□□□□□ -0.92
LINC00239-201ENST00000556973 GPA33Q99795 319 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 KCNS3Q9BQ31 491 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 KATNB1Q9BVA0 655 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 CHID1Q9BWS9 393 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 REEP1Q9H902 201 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 NRIP3Q9NQ35 241 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 POU2F3Q9UKI9 436 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 POMPQ9Y244 141 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 DSCAMO60469 2012 aa9.31□□□□□ -0.92
LINC00239-201ENST00000556973 DHRS12A0PJE2 317 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 ZNF503-AS2A6NEH8 195 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 XKRYO14609 159 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 SMPD2O60906 423 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 SEC14L2O76054 403 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 CCNB2O95067 398 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 CST1P01037 141 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 HLA-HP01893 362 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 DANCRP0C864 163 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 CD79AP11912 226 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 SDHAP31040 664 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 GSSP48637 474 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 RPS6KA3P51812 740 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 PIGFQ07326 219 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 CD47Q08722 323 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 FLOT2Q14254 428 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 MICAQ29983 383 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 RFX4Q33E94 735 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 GPR139Q6DWJ6 353 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 SLC25A47Q6Q0C1 308 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 SPNS3Q6ZMD2 512 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 FAM122BQ7Z309 247 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 MDP1Q86V88 176 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 ADGRG5Q8IZF4 528 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 LRRC75A-AS1Q8N1F1 130 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 OR4C15Q8NGM1 316 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 CANT1Q8WVQ1 401 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 IGFBPL1Q8WX77 278 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 NMD3Q96D46 503 aaKnown RBP9.3□□□□□ -0.92
LINC00239-201ENST00000556973 Q96M85 177 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 GRIP2Q9C0E4 1043 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 KCNN2Q9H2S1 579 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 CXorf56Q9H5V9 222 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 YY1AP1Q9H869 796 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms