RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 LRRC17Q8N6Y2 441 aa10.9□□□□□ -0.66
SNX6-207ENST00000556303 VRK1Q99986 396 aaPredicted RBP10.9□□□□□ -0.66
SNX6-207ENST00000556303 MRPL13Q9BYD1 178 aaKnown RBP10.9□□□□□ -0.66
SNX6-207ENST00000556303 SEC61A2Q9H9S3 476 aa10.9□□□□□ -0.66
SNX6-207ENST00000556303 ZNF224Q9NZL3 707 aa10.9□□□□□ -0.66
SNX6-207ENST00000556303 SLC7A8Q9UHI5 535 aa10.9□□□□□ -0.66
SNX6-207ENST00000556303 STAB1Q9NY15 2570 aa10.9□□□□□ -0.66
SNX6-207ENST00000556303 TMEM129A0AVI4 362 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 GMNCA6NCL1 334 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 SEC14L2O76054 403 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 IFNA2P01563 188 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 QDPRP09417 244 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 NR4A2P43354 598 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 GIPRP48546 466 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 PTDSS1P48651 473 aaKnown RBP10.89□□□□□ -0.67
SNX6-207ENST00000556303 GZMKP49863 264 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 ZNF84P51523 738 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 UGT2B15P54855 530 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 CLRN1P58418 232 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 LSM11P83369 360 aaKnown RBP eCLIP10.89□□□□□ -0.67
SNX6-207ENST00000556303 GALK2Q01415 458 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 RPL18Q07020 188 aaKnown RBP10.89□□□□□ -0.67
SNX6-207ENST00000556303 SNTB2Q13425 540 aaKnown RBP10.89□□□□□ -0.67
SNX6-207ENST00000556303 C6orf52Q5T4I8 152 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 CYB5R2Q6BCY4 276 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 HACD2Q6Y1H2 254 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 SPATA21Q7Z572 469 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 WDFY1Q8IWB7 410 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 SKA3Q8IX90 412 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 SLC15A3Q8IY34 581 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 RNF113BQ8IZP6 322 aaKnown RBP10.89□□□□□ -0.67
SNX6-207ENST00000556303 FNDC8Q8TC99 324 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 TMEM255BQ8WV15 326 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 HTRA1Q92743 480 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 MRPL24Q96A35 216 aaKnown RBP10.89□□□□□ -0.67
SNX6-207ENST00000556303 RCN3Q96D15 328 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 PRRC1Q96M27 445 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 MS4A5Q9H3V2 200 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 EFCAB1Q9HAE3 211 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 SMURF2Q9HAU4 748 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 YAE1D1Q9NRH1 226 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 INIPQ9NRY2 104 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 TMEM38BQ9NVV0 291 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 CDC42EP3Q9UKI2 254 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 CUBNO60494 3623 aa10.89□□□□□ -0.67
SNX6-207ENST00000556303 MCIDASD6RGH6 385 aa10.88□□□□□ -0.67
SNX6-207ENST00000556303 SYNGR3O43761 229 aa10.88□□□□□ -0.67
SNX6-207ENST00000556303 GPRIN2O60269 458 aa10.88□□□□□ -0.67
SNX6-207ENST00000556303 COX4I1P13073 169 aa10.88□□□□□ -0.67
SNX6-207ENST00000556303 GIFP27352 417 aa10.88□□□□□ -0.67
SNX6-207ENST00000556303 OR1E2P47887 323 aa10.88□□□□□ -0.67
SNX6-207ENST00000556303 PIGFQ07326 219 aa10.88□□□□□ -0.67
SNX6-207ENST00000556303 FXNQ16595 210 aa10.88□□□□□ -0.67
SNX6-207ENST00000556303 CHRFAM7AQ494W8 412 aa10.88□□□□□ -0.67
SNX6-207ENST00000556303 SLC36A2Q495M3 483 aa10.88□□□□□ -0.67
SNX6-207ENST00000556303 LRRC23Q53EV4 343 aaPredicted RBP10.88□□□□□ -0.67
SNX6-207ENST00000556303 C10orf128Q5T292 105 aa10.88□□□□□ -0.67
SNX6-207ENST00000556303 GKAP1Q5VSY0 366 aaPredicted RBP10.88□□□□□ -0.67
SNX6-207ENST00000556303 KRT80Q6KB66 452 aa10.88□□□□□ -0.67
SNX6-207ENST00000556303 TMEM53Q6P2H8 277 aa10.88□□□□□ -0.67
SNX6-207ENST00000556303 PODNL1Q6PEZ8 512 aa10.88□□□□□ -0.67
SNX6-207ENST00000556303 UGT2A3Q6UWM9 527 aa10.88□□□□□ -0.67
SNX6-207ENST00000556303 OR1J2Q8NGS2 313 aa10.88□□□□□ -0.67
SNX6-207ENST00000556303 PFN4Q8NHR9 129 aa10.88□□□□□ -0.67
SNX6-207ENST00000556303 GEMIN6Q8WXD5 167 aaKnown RBP10.88□□□□□ -0.67
SNX6-207ENST00000556303 ASB10Q8WXI3 467 aa10.88□□□□□ -0.67
SNX6-207ENST00000556303 MCHR2Q969V1 340 aa10.88□□□□□ -0.67
SNX6-207ENST00000556303 TPD52L3Q96J77 140 aa10.88□□□□□ -0.67
SNX6-207ENST00000556303 TXNIPQ9H3M7 391 aa10.88□□□□□ -0.67
SNX6-207ENST00000556303 C20orf141Q9NUB4 165 aa10.88□□□□□ -0.67
SNX6-207ENST00000556303 CMTM6Q9NX76 183 aa10.88□□□□□ -0.67
SNX6-207ENST00000556303 LPAR3Q9UBY5 353 aa10.88□□□□□ -0.67
SNX6-207ENST00000556303 A4GNTQ9UNA3 340 aa10.88□□□□□ -0.67
SNX6-207ENST00000556303 HIF3AQ9Y2N7 669 aa10.88□□□□□ -0.67
SNX6-207ENST00000556303 MALRD1Q5VYJ5 2156 aa10.87□□□□□ -0.67
SNX6-207ENST00000556303 TRMUO75648 421 aaKnown RBP10.87□□□□□ -0.67
SNX6-207ENST00000556303 STAMBPO95630 424 aa10.87□□□□□ -0.67
SNX6-207ENST00000556303 IFNW1P05000 195 aa10.87□□□□□ -0.67
SNX6-207ENST00000556303 F13BP05160 661 aa10.87□□□□□ -0.67
SNX6-207ENST00000556303 ACADSP16219 412 aa10.87□□□□□ -0.67
SNX6-207ENST00000556303 SELENOVP59797 346 aa10.87□□□□□ -0.67
SNX6-207ENST00000556303 MELKQ14680 651 aa10.87□□□□□ -0.67
SNX6-207ENST00000556303 ARMC4Q5T2S8 1044 aa10.87□□□□□ -0.67
SNX6-207ENST00000556303 FAM205BPQ63HN1 556 aa10.87□□□□□ -0.67
SNX6-207ENST00000556303 C8orf82Q6P1X6 216 aaPredicted RBP10.87□□□□□ -0.67
SNX6-207ENST00000556303 CBLL1Q75N03 491 aa10.87□□□□□ -0.67
SNX6-207ENST00000556303 SLC16A14Q7RTX9 510 aa10.87□□□□□ -0.67
SNX6-207ENST00000556303 ZNF584Q8IVC4 421 aa10.87□□□□□ -0.67
SNX6-207ENST00000556303 C1orf174Q8IYL3 243 aa10.87□□□□□ -0.67
SNX6-207ENST00000556303 OFCC1Q8IZS5 231 aa10.87□□□□□ -0.67
SNX6-207ENST00000556303 ZNF786Q8N393 782 aa10.87□□□□□ -0.67
SNX6-207ENST00000556303 SVOPLQ8N434 492 aa10.87□□□□□ -0.67
SNX6-207ENST00000556303 FAM156AQ8NDB6 213 aa10.87□□□□□ -0.67
SNX6-207ENST00000556303 NOXO1Q8NFA2 376 aa10.87□□□□□ -0.67
SNX6-207ENST00000556303 CMTM5Q96DZ9 223 aa10.87□□□□□ -0.67
SNX6-207ENST00000556303 FOXN4Q96NZ1 517 aa10.87□□□□□ -0.67
SNX6-207ENST00000556303 ALG12Q9BV10 488 aa10.87□□□□□ -0.67
SNX6-207ENST00000556303 LRMDAQ9H2I8 198 aa10.87□□□□□ -0.67
SNX6-207ENST00000556303 KCNN2Q9H2S1 579 aa10.87□□□□□ -0.67
SNX6-207ENST00000556303 SIAEQ9HAT2 523 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms