RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 QPRTQ15274 297 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 ZNF74Q16587 644 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 TSTQ16762 297 aaKnown RBP6.14□□□□□ -1.43
SLIRP-204ENST00000555890 LCN1P1Q5VSP4 162 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 FAM69BQ5VUD6 431 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 NIPAL3Q6P499 406 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 OPN5Q6U736 354 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 FAM198BQ6UWH4 519 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 TMPRSS11AQ6ZMR5 421 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 ZNF517Q6ZMY9 492 aaPredicted RBP6.14□□□□□ -1.43
SLIRP-204ENST00000555890 GDPGP1Q6ZNW5 385 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 TUBA1AQ71U36 451 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 NDUFAF7Q7L592 441 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 GRINAQ7Z429 371 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 DND1Q8IYX4 353 aaKnown RBP6.14□□□□□ -1.43
SLIRP-204ENST00000555890 KLHL36Q8N4N3 616 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 FAM98AQ8NCA5 519 aaKnown RBP6.14□□□□□ -1.43
SLIRP-204ENST00000555890 SLC37A3Q8NCC5 494 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 KBTBD8Q8NFY9 601 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 OR52E2Q8NGJ4 325 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 OR5M3Q8NGP4 307 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 GPR119Q8TDV5 335 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 ELP5Q8TE02 316 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 ST8SIA1Q92185 356 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 HGDQ93099 445 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 ZHX1-C8orf76Q96EF9 292 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 IMMP1LQ96LU5 166 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 OR5M11Q96RB7 305 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 ENKD1Q9H0I2 346 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 CXXC4Q9H2H0 198 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 METTL7AQ9H8H3 244 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 AKIRIN1Q9H9L7 192 aaPredicted RBP6.14□□□□□ -1.43
SLIRP-204ENST00000555890 FKRPQ9H9S5 495 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 MCCC2Q9HCC0 563 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 MMP25Q9NPA2 562 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 HINT3Q9NQE9 182 aaKnown RBP6.14□□□□□ -1.43
SLIRP-204ENST00000555890 INPP5EQ9NRR6 644 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 TAS2R16Q9NYV7 291 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 TAS2R10Q9NYW0 307 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 KLRF1Q9NZS2 232 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 PISDQ9UG56 409 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 ZNF229Q9UJW7 825 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 OSGIN1Q9UJX0 560 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 TMED7Q9Y3B3 224 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 PKDREJQ9NTG1 2253 aa6.14□□□□□ -1.43
SLIRP-204ENST00000555890 PCNX3Q9H6A9 2034 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 IGKV1D-42A0A075B6H8 117 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 FAM183AA6NL82 134 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 A8MVM7 634 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 FAM171A2A8MVW0 826 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 BLOC1S5-TXNDC5H3BN57 136 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 SOCS6O14544 535 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 OR2T1O43869 369 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 GMFGO60234 142 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 KLF7O75840 302 aaPredicted RBP6.13□□□□□ -1.43
SLIRP-204ENST00000555890 OR2J2O76002 312 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 CLPXO76031 633 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 OR6A2O95222 327 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 MT-ATP6P00846 226 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 F13BP05160 661 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 UMODP07911 640 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 COX6A1P12074 109 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 APEHP13798 732 aaKnown RBP6.13□□□□□ -1.43
SLIRP-204ENST00000555890 ZNF182P17025 639 aaPredicted RBP6.13□□□□□ -1.43
SLIRP-204ENST00000555890 TCN2P20062 427 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 GADD45AP24522 165 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 PSMA1P25786 263 aaKnown RBP6.13□□□□□ -1.43
SLIRP-204ENST00000555890 APOBEC1P41238 236 aaKnown RBP6.13□□□□□ -1.43
SLIRP-204ENST00000555890 KIR2DL2P43627 348 aaPredicted RBP6.13□□□□□ -1.43
SLIRP-204ENST00000555890 CAPZA2P47755 286 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 ETV1P50549 477 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 ZNF41P51814 821 aaPredicted RBP6.13□□□□□ -1.43
SLIRP-204ENST00000555890 MAP2K6P52564 334 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 GAS1P54826 345 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 VBP1P61758 197 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 LSM3P62310 102 aaKnown RBP6.13□□□□□ -1.43
SLIRP-204ENST00000555890 ACTC1P68032 377 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 ACTA1P68133 377 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 FHL1Q13642 323 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 SSPNQ14714 243 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 MFSD13AQ14CX5 517 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 SPCS2Q15005 226 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 PON3Q15166 354 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 MOGQ16653 247 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 KLHL12Q53G59 568 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 ALG10Q5BKT4 473 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 GPR139Q6DWJ6 353 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 C16orf47Q6ZP98 133 aaPredicted RBP6.13□□□□□ -1.43
SLIRP-204ENST00000555890 LINC00299Q6ZSB3 139 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 USP43Q70EL4 1123 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 NANOGNBQ7Z5D8 188 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 ADCK1Q86TW2 530 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 ESX1Q8N693 406 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 ACBD7Q8N6N7 88 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 LRRC17Q8N6Y2 441 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 OR6S1Q8NH40 331 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 ASB15Q8WXK1 588 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 SPACA9Q96E40 222 aaPredicted RBP6.13□□□□□ -1.43
SLIRP-204ENST00000555890 KTI12Q96EK9 354 aaPredicted RBP6.13□□□□□ -1.43
SLIRP-204ENST00000555890 RASL10BQ96S79 203 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms