RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 APOL4Q9BPW4 351 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 C12orf49Q9H741 205 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 ASB6Q9NWX5 421 aa11.02□□□□□ -0.65
SHMT2-221ENST00000555773 A8MXE2 369 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 TLX2O43763 284 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-221ENST00000555773 UPK3AO75631 287 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 SMNDC1O75940 238 aaKnown RBP eCLIP11.01□□□□□ -0.65
SHMT2-221ENST00000555773 QDPRP09417 244 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 BMP5P22003 454 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 SLC25A1P53007 311 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 SNRPGP62308 76 aaKnown RBP11.01□□□□□ -0.65
SHMT2-221ENST00000555773 ADORA2A-AS1P86434 159 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 CD47Q08722 323 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 P2RY6Q15077 328 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 SLC25A30Q5SVS4 291 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 LRFN4Q6PJG9 635 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 DNM1P34Q6PK57 102 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 Q6ZT83 130 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 NCCRP1Q6ZVX7 275 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-221ENST00000555773 PTCHD4Q6ZW05 846 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 MRGPRGQ86SM5 289 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 LIX1LQ8IVB5 337 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 WDFY1Q8IWB7 410 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 UBE2J2Q8N2K1 259 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 FAM26EQ8N5C1 309 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 ZNF610Q8N9Z0 462 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 SYT14Q8NB59 555 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 SLC37A3Q8NCC5 494 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 SETD9Q8NE22 299 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 TMEM163Q8TC26 289 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 PTP4A1Q93096 173 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 MCHR2Q969V1 340 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 ULBP2Q9BZM5 246 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 SLC7A10Q9NS82 523 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 IMPAD1Q9NX62 359 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 JKAMPQ9P055 326 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 MALT1Q9UDY8 824 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 FKBP7Q9Y680 259 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 HSPE1-MOB4S4R3N1 261 aa11.01□□□□□ -0.65
SHMT2-221ENST00000555773 MYO7BQ6PIF6 2116 aa11□□□□□ -0.65
SHMT2-221ENST00000555773 OR6C68A6NDL8 312 aa11□□□□□ -0.65
SHMT2-221ENST00000555773 ZNF587BE7ETH6 402 aa11□□□□□ -0.65
SHMT2-221ENST00000555773 PRR23D1E9PI22 279 aaPredicted RBP11□□□□□ -0.65
SHMT2-221ENST00000555773 DHHO43323 396 aa11□□□□□ -0.65
SHMT2-221ENST00000555773 KHDRBS3O75525 346 aaKnown RBP11□□□□□ -0.65
SHMT2-221ENST00000555773 SLC2A10O95528 541 aa11□□□□□ -0.65
SHMT2-221ENST00000555773 PRR23D2P0DMB1 279 aaPredicted RBP11□□□□□ -0.65
SHMT2-221ENST00000555773 EDNRAP25101 427 aa11□□□□□ -0.65
SHMT2-221ENST00000555773 MPGP29372 298 aa11□□□□□ -0.65
SHMT2-221ENST00000555773 CENPAP49450 140 aa11□□□□□ -0.65
SHMT2-221ENST00000555773 CRMP1Q14194 572 aa11□□□□□ -0.65
SHMT2-221ENST00000555773 C10orf128Q5T292 105 aa11□□□□□ -0.65
SHMT2-221ENST00000555773 SLC25A47Q6Q0C1 308 aa11□□□□□ -0.65
SHMT2-221ENST00000555773 TCEANCQ8N8B7 351 aa11□□□□□ -0.65
SHMT2-221ENST00000555773 SDR9C7Q8NEX9 313 aa11□□□□□ -0.65
SHMT2-221ENST00000555773 OR2T4Q8NH00 348 aa11□□□□□ -0.65
SHMT2-221ENST00000555773 RHOXF1Q8NHV9 184 aa11□□□□□ -0.65
SHMT2-221ENST00000555773 FAM81AQ8TBF8 368 aa11□□□□□ -0.65
SHMT2-221ENST00000555773 ZNF184Q99676 751 aaPredicted RBP11□□□□□ -0.65
SHMT2-221ENST00000555773 HDHD5Q9BXW7 423 aa11□□□□□ -0.65
SHMT2-221ENST00000555773 NMNAT2Q9BZQ4 307 aa11□□□□□ -0.65
SHMT2-221ENST00000555773 NUAK2Q9H093 628 aa11□□□□□ -0.65
SHMT2-221ENST00000555773 OPN3Q9H1Y3 402 aaPredicted RBP11□□□□□ -0.65
SHMT2-221ENST00000555773 SYT4Q9H2B2 425 aa11□□□□□ -0.65
SHMT2-221ENST00000555773 CRLF2Q9HC73 371 aa11□□□□□ -0.65
SHMT2-221ENST00000555773 GPR35Q9HC97 309 aa11□□□□□ -0.65
SHMT2-221ENST00000555773 ELOVL5Q9NYP7 299 aa11□□□□□ -0.65
SHMT2-221ENST00000555773 H2AFY2Q9P0M6 372 aaPredicted RBP11□□□□□ -0.65
SHMT2-221ENST00000555773 PRSS50Q9UI38 385 aa11□□□□□ -0.65
SHMT2-221ENST00000555773 RAB26Q9ULW5 256 aa11□□□□□ -0.65
SHMT2-221ENST00000555773 B9D1Q9UPM9 204 aa11□□□□□ -0.65
SHMT2-221ENST00000555773 MOKQ9UQ07 419 aa11□□□□□ -0.65
SHMT2-221ENST00000555773 PRKYO43930 277 aa10.99□□□□□ -0.65
SHMT2-221ENST00000555773 SLC16A7O60669 478 aa10.99□□□□□ -0.65
SHMT2-221ENST00000555773 IGHV3-9P01782 118 aa10.99□□□□□ -0.65
SHMT2-221ENST00000555773 GUCA1AP43080 201 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-221ENST00000555773 ZNF84P51523 738 aa10.99□□□□□ -0.65
SHMT2-221ENST00000555773 BLVRAP53004 296 aa10.99□□□□□ -0.65
SHMT2-221ENST00000555773 SH3BGRP55822 239 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-221ENST00000555773 ROR2Q01974 943 aaKnown RBP10.99□□□□□ -0.65
SHMT2-221ENST00000555773 TGFBR3Q03167 851 aa10.99□□□□□ -0.65
SHMT2-221ENST00000555773 LGALS3BPQ08380 585 aa10.99□□□□□ -0.65
SHMT2-221ENST00000555773 FAPQ12884 760 aa10.99□□□□□ -0.65
SHMT2-221ENST00000555773 PHYHD1Q5SRE7 291 aa10.99□□□□□ -0.65
SHMT2-221ENST00000555773 C6orf52Q5T4I8 152 aa10.99□□□□□ -0.65
SHMT2-221ENST00000555773 ZNF691Q5VV52 312 aa10.99□□□□□ -0.65
SHMT2-221ENST00000555773 MEDAGQ5VYS4 303 aa10.99□□□□□ -0.65
SHMT2-221ENST00000555773 ZNF474Q6S9Z5 364 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-221ENST00000555773 USP51Q70EK9 711 aa10.99□□□□□ -0.65
SHMT2-221ENST00000555773 CXXC5Q7LFL8 322 aaKnown RBP10.99□□□□□ -0.65
SHMT2-221ENST00000555773 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.99□□□□□ -0.65
SHMT2-221ENST00000555773 ZBTB46Q86UZ6 589 aa10.99□□□□□ -0.65
SHMT2-221ENST00000555773 CPOQ8IVL8 374 aa10.99□□□□□ -0.65
SHMT2-221ENST00000555773 OR6V1Q8N148 313 aa10.99□□□□□ -0.65
SHMT2-221ENST00000555773 GABRG1Q8N1C3 465 aa10.99□□□□□ -0.65
SHMT2-221ENST00000555773 ZNF808Q8N4W9 903 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-221ENST00000555773 CYB561A3Q8NBI2 242 aa10.99□□□□□ -0.65
SHMT2-221ENST00000555773 CA5BP1Q8WTZ4 195 aa10.99□□□□□ -0.65
SHMT2-221ENST00000555773 LRRC46Q96FV0 321 aa10.99□□□□□ -0.65
SHMT2-221ENST00000555773 Q96MT0 163 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms