RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 ASAH2BP0C7U1 165 aa9.29□□□□□ -0.92
TDP1-212ENST00000555565 PATE4P0C8F1 98 aa9.29□□□□□ -0.92
TDP1-212ENST00000555565 H2AFXP16104 143 aaPredicted RBP9.29□□□□□ -0.92
TDP1-212ENST00000555565 PTDSS1P48651 473 aaKnown RBP9.29□□□□□ -0.92
TDP1-212ENST00000555565 ARFIP2P53365 341 aa9.29□□□□□ -0.92
TDP1-212ENST00000555565 CDH15P55291 814 aa9.29□□□□□ -0.92
TDP1-212ENST00000555565 MELKQ14680 651 aa9.29□□□□□ -0.92
TDP1-212ENST00000555565 TRMT5Q32P41 509 aaKnown RBP9.29□□□□□ -0.92
TDP1-212ENST00000555565 RABL3Q5HYI8 236 aa9.29□□□□□ -0.92
TDP1-212ENST00000555565 INTS11Q5TA45 600 aaKnown RBP9.29□□□□□ -0.92
TDP1-212ENST00000555565 LRFN4Q6PJG9 635 aa9.29□□□□□ -0.92
TDP1-212ENST00000555565 PIWIL3Q7Z3Z3 882 aaKnown RBP9.29□□□□□ -0.92
TDP1-212ENST00000555565 ZNF584Q8IVC4 421 aa9.29□□□□□ -0.92
TDP1-212ENST00000555565 SKA3Q8IX90 412 aa9.29□□□□□ -0.92
TDP1-212ENST00000555565 ZNF786Q8N393 782 aa9.29□□□□□ -0.92
TDP1-212ENST00000555565 SLC22A24Q8N4F4 322 aa9.29□□□□□ -0.92
TDP1-212ENST00000555565 SLC26A7Q8TE54 656 aa9.29□□□□□ -0.92
TDP1-212ENST00000555565 GCDHQ92947 438 aaPredicted RBP9.29□□□□□ -0.92
TDP1-212ENST00000555565 MRPL24Q96A35 216 aaKnown RBP9.29□□□□□ -0.92
TDP1-212ENST00000555565 SLC25A44Q96H78 314 aaPredicted RBP9.29□□□□□ -0.92
TDP1-212ENST00000555565 SLC19A3Q9BZV2 496 aa9.29□□□□□ -0.92
TDP1-212ENST00000555565 METTL17Q9H7H0 456 aaPredicted RBP9.29□□□□□ -0.92
TDP1-212ENST00000555565 MEPEQ9NQ76 525 aaPredicted RBP9.29□□□□□ -0.92
TDP1-212ENST00000555565 ZNF229Q9UJW7 825 aa9.29□□□□□ -0.92
TDP1-212ENST00000555565 LYNX1G3V0Z9 82 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 RNF13O43567 381 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 SYNGR3O43761 229 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 SASH3O75995 380 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 UBL3O95164 117 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 RAB36O95755 333 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 ERCC1P07992 297 aaPredicted RBP9.28□□□□□ -0.92
TDP1-212ENST00000555565 PGA4P0DJD7 388 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 PGA3P0DJD8 388 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 LYNX1P0DP58 116 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 TNFRSF1BP20333 461 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 GLRXP35754 106 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 EVX1P49640 407 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 DVL1P1P54792 670 aaPredicted RBP9.28□□□□□ -0.92
TDP1-212ENST00000555565 ACTG1P63261 375 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 RIN1Q13671 783 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 CYLC2Q14093 348 aaPredicted RBP9.28□□□□□ -0.92
TDP1-212ENST00000555565 RAB39AQ14964 217 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 FXNQ16595 210 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 PEG10Q86TG7 708 aaKnown RBP9.28□□□□□ -0.92
TDP1-212ENST00000555565 CARM1Q86X55 608 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 CALHM3Q86XJ0 350 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 UBASH3BQ8TF42 649 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 RASSF5Q8WWW0 418 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 ZNF566Q969W8 418 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 LRRC58Q96CX6 371 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 SH3GL3Q99963 347 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 SYT3Q9BQG1 590 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 TMEM120AQ9BXJ8 343 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 TPK1Q9H3S4 243 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 SH3GLB1Q9Y371 365 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 SPEF1Q9Y4P9 236 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 WNK2Q9Y3S1 2297 aa9.28□□□□□ -0.92
TDP1-212ENST00000555565 VWFP04275 2813 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 M0R233 179 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 DHHO43323 396 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 SHOX2O60902 331 aaPredicted RBP9.27□□□□□ -0.93
TDP1-212ENST00000555565 BCL10O95999 233 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 MT-ND1P03886 318 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 HIST1H2ABP04908 130 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 SERPINA5P05154 406 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 QDPRP09417 244 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 OR8G3PP0DMU2 310 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 UMPSP11172 480 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 APEX1P27695 318 aaKnown RBP9.27□□□□□ -0.93
TDP1-212ENST00000555565 CHN2P52757 468 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 UGT2B15P54855 530 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 HILS1P60008 231 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 TRIP10Q15642 601 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 HIST3H3Q16695 136 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 AWAT1Q58HT5 328 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 GKAP1Q5VSY0 366 aaPredicted RBP9.27□□□□□ -0.93
TDP1-212ENST00000555565 RINLQ6ZS11 566 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 HIST3H2AQ7L7L0 130 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 NANOGNBQ7Z5D8 188 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 LRP11Q86VZ4 500 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 NKAIN4Q8IVV8 208 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 OR8J3Q8NGG0 315 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 PFN4Q8NHR9 129 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 TMEM255BQ8WV15 326 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 HIST1H2ACQ93077 130 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 ZNF583Q96ND8 569 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 SNX18Q96RF0 628 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 SH3GL1Q99961 368 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 ECSITQ9BQ95 431 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 TMEM38BQ9NVV0 291 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 MYEF2Q9P2K5 600 aaKnown RBP9.27□□□□□ -0.93
TDP1-212ENST00000555565 REV1Q9UBZ9 1251 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 FZR1Q9UM11 496 aa9.27□□□□□ -0.93
TDP1-212ENST00000555565 BLOC1S5-TXNDC5H3BN57 136 aa9.26□□□□□ -0.93
TDP1-212ENST00000555565 RGS9O75916 674 aaPredicted RBP9.26□□□□□ -0.93
TDP1-212ENST00000555565 OR7A10O76100 309 aa9.26□□□□□ -0.93
TDP1-212ENST00000555565 NPPAP01160 153 aa9.26□□□□□ -0.93
TDP1-212ENST00000555565 IGHG1P01857 330 aa9.26□□□□□ -0.93
TDP1-212ENST00000555565 F13BP05160 661 aa9.26□□□□□ -0.93
TDP1-212ENST00000555565 FUT1P19526 365 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms