RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 ZNF773Q6PK81 442 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.07□□□□□ -0.96
SRP54-208ENST00000555557 TUSC5Q8IXB3 177 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 SPARTQ8N0X7 666 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 ZNF511Q8NB15 262 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 PROKR2Q8NFJ6 384 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 OR52I1Q8NGK6 324 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 OR6X1Q8NH79 312 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 RNF128Q8TEB7 428 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 FAR1Q8WVX9 515 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 IPCEF1Q8WWN9 437 aaPredicted RBP9.07□□□□□ -0.96
SRP54-208ENST00000555557 SLC25A44Q96H78 314 aaPredicted RBP9.07□□□□□ -0.96
SRP54-208ENST00000555557 SF3B5Q9BWJ5 86 aaKnown RBP9.07□□□□□ -0.96
SRP54-208ENST00000555557 MRPL13Q9BYD1 178 aaKnown RBP9.07□□□□□ -0.96
SRP54-208ENST00000555557 PAQR5Q9NXK6 330 aaPredicted RBP9.07□□□□□ -0.96
SRP54-208ENST00000555557 VSX1Q9NZR4 365 aaPredicted RBP9.07□□□□□ -0.96
SRP54-208ENST00000555557 B9D1Q9UPM9 204 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 FLVCR1Q9Y5Y0 555 aa9.07□□□□□ -0.96
SRP54-208ENST00000555557 FAM208BQ5VWN6 2430 aa9.06□□□□□ -0.96
SRP54-208ENST00000555557 A0A087WXM4 84 aa9.06□□□□□ -0.96
SRP54-208ENST00000555557 EFCAB10A6NFE3 127 aa9.06□□□□□ -0.96
SRP54-208ENST00000555557 SLC22A31A6NKX4 558 aa9.06□□□□□ -0.96
SRP54-208ENST00000555557 PGA4P0DJD7 388 aa9.06□□□□□ -0.96
SRP54-208ENST00000555557 PGA3P0DJD8 388 aa9.06□□□□□ -0.96
SRP54-208ENST00000555557 CENPAP49450 140 aa9.06□□□□□ -0.96
SRP54-208ENST00000555557 SLC25A1P53007 311 aa9.06□□□□□ -0.96
SRP54-208ENST00000555557 HCCSP53701 268 aa9.06□□□□□ -0.96
SRP54-208ENST00000555557 CLRN1P58418 232 aa9.06□□□□□ -0.96
SRP54-208ENST00000555557 CNPY1Q3B7I2 92 aa9.06□□□□□ -0.96
SRP54-208ENST00000555557 PHYHD1Q5SRE7 291 aa9.06□□□□□ -0.96
SRP54-208ENST00000555557 LINC01590Q5TEZ4 76 aa9.06□□□□□ -0.96
SRP54-208ENST00000555557 ZNF585AQ6P3V2 769 aa9.06□□□□□ -0.96
SRP54-208ENST00000555557 OR2T4Q8NH00 348 aa9.06□□□□□ -0.96
SRP54-208ENST00000555557 NSMAFQ92636 917 aa9.06□□□□□ -0.96
SRP54-208ENST00000555557 MYDGFQ969H8 173 aa9.06□□□□□ -0.96
SRP54-208ENST00000555557 OR2M2Q96R28 347 aa9.06□□□□□ -0.96
SRP54-208ENST00000555557 TRIB1Q96RU8 372 aa9.06□□□□□ -0.96
SRP54-208ENST00000555557 TBX5Q99593 518 aa9.06□□□□□ -0.96
SRP54-208ENST00000555557 ALG12Q9BV10 488 aa9.06□□□□□ -0.96
SRP54-208ENST00000555557 ASF1BQ9NVP2 202 aa9.06□□□□□ -0.96
SRP54-208ENST00000555557 CNOT2Q9NZN8 540 aaKnown RBP9.06□□□□□ -0.96
SRP54-208ENST00000555557 WARS2Q9UGM6 360 aaKnown RBP9.06□□□□□ -0.96
SRP54-208ENST00000555557 TLN1Q9Y490 2541 aaKnown RBP9.06□□□□□ -0.96
SRP54-208ENST00000555557 TVP23AA6NH52 213 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 SLC22A20A6NK97 555 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 SELENOFO60613 162 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 ZNF432O94892 652 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 FADS2O95864 444 aaKnown RBP9.05□□□□□ -0.96
SRP54-208ENST00000555557 CLPTM1O96005 669 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 IGHG1P01857 330 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 TFAP2AP05549 437 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 PIPP12273 146 aaPredicted RBP9.05□□□□□ -0.96
SRP54-208ENST00000555557 EDNRAP25101 427 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 NAA10P41227 235 aaPredicted RBP9.05□□□□□ -0.96
SRP54-208ENST00000555557 EMX1Q04741 257 aaPredicted RBP9.05□□□□□ -0.96
SRP54-208ENST00000555557 RAB40BQ12829 278 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 LSAMPQ13449 338 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 NEDD8Q15843 81 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 KLHL22Q53GT1 634 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 FAM205BPQ63HN1 556 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 B3GNT6Q6ZMB0 384 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 KCTD8Q6ZWB6 473 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 PRSS48Q7RTY5 328 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.05□□□□□ -0.96
SRP54-208ENST00000555557 NOXO1Q8NFA2 376 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 TMEM80Q96HE8 168 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 SIGLEC11Q96RL6 698 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 MRPS26Q9BYN8 205 aaKnown RBP9.05□□□□□ -0.96
SRP54-208ENST00000555557 CALHM2Q9HA72 323 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 ADGRL4Q9HBW9 690 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 MRPS18AQ9NVS2 196 aaKnown RBP9.05□□□□□ -0.96
SRP54-208ENST00000555557 CLEC2DQ9UHP7 191 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 COA3Q9Y2R0 106 aaPredicted RBP9.05□□□□□ -0.96
SRP54-208ENST00000555557 SNX5Q9Y5X3 404 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 ATRXP46100 2492 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 IGLV1-36A0A0B4J1U3 117 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 M0R3G1 203 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 GLCEO94923 617 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 MPZL1O95297 269 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 IGHV3-9P01782 118 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 HLA-DQA2P01906 255 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 QDPRP09417 244 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 PTGS2P35354 604 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 RPS27P42677 84 aaKnown RBP9.05□□□□□ -0.96
SRP54-208ENST00000555557 TDGF1P3P51864 188 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 KLRB1Q12918 225 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 KRTCAP3Q53RY4 240 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 LRFN4Q6PJG9 635 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 PCSK4Q6UW60 755 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 AAED1Q7RTV5 226 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 ADGRE4PQ86SQ3 457 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 LHFPL3Q86UP9 236 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 ZBTB46Q86UZ6 589 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 TMEM123Q8N131 208 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 OR6N1Q8NGY5 312 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 HTRA1Q92743 480 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 MCHR2Q969V1 340 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 PPP1R14BQ96C90 147 aa9.05□□□□□ -0.96
SRP54-208ENST00000555557 NMD3Q96D46 503 aaKnown RBP9.05□□□□□ -0.96
SRP54-208ENST00000555557 ADAD1Q96M93 576 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms