RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 AURKCQ9UQB9 309 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 TMEM5Q9Y2B1 443 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 POFUT2Q9Y2G5 429 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 UGT2A1Q9Y4X1 527 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 U3KQV3 271 aa10.77□□□□□ -0.69
SYNE2-214ENST00000554928 RAI1Q7Z5J4 1906 aaPredicted RBP10.76□□□□□ -0.69
SYNE2-214ENST00000554928 TCRBV3S1A0A5B6 114 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 DHRS12A0PJE2 317 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 HTR3EA5X5Y0 456 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 AQP12BA6NM10 295 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 HS3ST1O14792 307 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 DHHO43323 396 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 OR10H3O60404 316 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 IGHG1P01857 330 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 CD14P08571 375 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 IGFBP1P08833 259 aaPredicted RBP10.76□□□□□ -0.69
SYNE2-214ENST00000554928 CDAP32320 146 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 RPL4P36578 427 aaKnown RBP10.76□□□□□ -0.69
SYNE2-214ENST00000554928 DAP3P51398 398 aaKnown RBP10.76□□□□□ -0.69
SYNE2-214ENST00000554928 HMGA2P52926 109 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 SH3BGRP55822 239 aaPredicted RBP10.76□□□□□ -0.69
SYNE2-214ENST00000554928 UBE2NP61088 152 aaKnown RBP10.76□□□□□ -0.69
SYNE2-214ENST00000554928 FLOT2Q14254 428 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 TESK1Q15569 626 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 FAM98BQ52LJ0 330 aaKnown RBP10.76□□□□□ -0.69
SYNE2-214ENST00000554928 MESTQ5EB52 335 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 OTPQ5XKR4 325 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 ZNF770Q6IQ21 691 aaPredicted RBP10.76□□□□□ -0.69
SYNE2-214ENST00000554928 ZNF627Q7L945 461 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 SPATA24Q86W54 205 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 SKA3Q8IX90 412 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 AQP12AQ8IXF9 295 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 CDK20Q8IZL9 346 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 IGFBPL1Q8WX77 278 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 NSMAFQ92636 917 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 UTP4Q969X6 686 aaKnown RBP10.76□□□□□ -0.69
SYNE2-214ENST00000554928 SH3GL3Q99963 347 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 LRMDAQ9H2I8 198 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 NGBQ9NPG2 151 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 B3GAT2Q9NPZ5 323 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 TMEM38BQ9NVV0 291 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 B3GNT2Q9NY97 397 aa10.76□□□□□ -0.69
SYNE2-214ENST00000554928 MYO9AB2RTY4 2548 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 TEX13CA0A0J9YWL9 993 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 NPIPB13A6NJU9 1138 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 NPIPB4C9JG80 1138 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 E7EQL1 145 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 ATP6V1G2-DDX39BF2Z307 99 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 NDUFB2O95178 105 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 PPP1R3DO95685 299 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 GASTP01350 101 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 IGLV1-44P01699 117 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 RAF1P04049 648 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 SCG5P05408 212 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 SOD3P08294 240 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 CECR9P0C854 216 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 RAP2AP10114 183 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 FPR3P25089 353 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 CALCRP30988 508 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 HOXC12P31275 282 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 CAPZA2P47755 286 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 GSSP48637 474 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 IDH3GP51553 393 aaPredicted RBP10.75□□□□□ -0.69
SYNE2-214ENST00000554928 ZNF133P52736 654 aaPredicted RBP10.75□□□□□ -0.69
SYNE2-214ENST00000554928 CDH11P55287 796 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 SMIM11AP58511 58 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 PIGFQ07326 219 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 CD47Q08722 323 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 KEAP1Q14145 624 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 ETFDHQ16134 617 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 PGGHGQ32M88 737 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 ZNF672Q499Z4 452 aaPredicted RBP10.75□□□□□ -0.69
SYNE2-214ENST00000554928 OR2T5Q6IEZ7 315 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 C1orf94Q6P1W5 598 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 SLC25A47Q6Q0C1 308 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 PTCHD4Q6ZW05 846 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 HS3ST5Q8IZT8 346 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 OR2T29Q8NH02 315 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 ZNF75AQ96N20 296 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 FOXN4Q96NZ1 517 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 TRIM15Q9C019 465 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 OR52D1Q9H346 318 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 CRNNQ9UBG3 495 aaPredicted RBP10.75□□□□□ -0.69
SYNE2-214ENST00000554928 TMCC3Q9ULS5 477 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 MOKQ9UQ07 419 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 SAMHD1Q9Y3Z3 626 aaKnown RBP10.75□□□□□ -0.69
SYNE2-214ENST00000554928 IER3IP1Q9Y5U9 82 aa10.75□□□□□ -0.69
SYNE2-214ENST00000554928 ANKRD17O75179 2603 aaKnown RBP10.75□□□□□ -0.69
SYNE2-214ENST00000554928 CREBBPQ92793 2442 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 ARHGEF9O43307 516 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 FKBP6O75344 327 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 KRT36O76013 467 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 WNT11O96014 354 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 CD79AP11912 226 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 DNASE1P24855 282 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 PTAFRP25105 342 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 ART1P52961 327 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 NPRL3Q12980 569 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 CCNIQ14094 377 aa10.74□□□□□ -0.69
SYNE2-214ENST00000554928 ANKDD1AQ495B1 522 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms