RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 BCKDHAP12694 445 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 IGHV1-2P23083 117 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 FASP25445 335 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 PSMA2P25787 234 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 AK4P27144 223 aaPredicted RBP1.13□□□□□ -2.23
PRPF39-208ENST00000554785 HPDP32754 393 aaPredicted RBP1.13□□□□□ -2.23
PRPF39-208ENST00000554785 RPL4P36578 427 aaKnown RBP1.13□□□□□ -2.23
PRPF39-208ENST00000554785 MDH2P40926 338 aaKnown RBP1.13□□□□□ -2.23
PRPF39-208ENST00000554785 GNPDA1P46926 289 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 KRT6CP48668 564 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 MYL6P60660 151 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 NUCB2P80303 420 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 ASAH1Q13510 395 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 ELAVL3Q14576 367 aaKnown RBP1.13□□□□□ -2.23
PRPF39-208ENST00000554785 KCNJ11Q14654 390 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 ZBTB6Q15916 424 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 HNRNPA1L2Q32P51 320 aaKnown RBP1.13□□□□□ -2.23
PRPF39-208ENST00000554785 LINC01620Q4KN68 170 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 FAM74A3Q4VXF1 159 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 TEX44Q53QW1 395 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 PAN3Q58A45 887 aaKnown RBP1.13□□□□□ -2.23
PRPF39-208ENST00000554785 UTF1Q5T230 341 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 C9orf64Q5T6V5 341 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 SLC22A10Q63ZE4 541 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 SULT1C3Q6IMI6 304 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 BLOC1S2Q6QNY1 142 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 CBLN3Q6UW01 205 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 PAMR1Q6UXH9 720 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 CLEC20AQ6ZU45 233 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 LANCL3Q6ZV70 420 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 HSD11B1LQ7Z5J1 315 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 ANKRD37Q7Z713 158 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 IQCKQ8N0W5 287 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 FBXL16Q8N461 479 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 CD177Q8N6Q3 437 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 TEX9Q8N6V9 391 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 CSNK1A1LQ8N752 337 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 NECAB1Q8N987 351 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 FADS6Q8N9I5 356 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 OR52K2Q8NGK3 314 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 ERMNQ8TAM6 284 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 ZPLD1Q8TCW7 415 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 MRAPQ8TCY5 172 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 ADAMTS16Q8TE57 1224 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 NAT6Q93015 286 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 OTUB2Q96DC9 234 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 TMA16Q96EY4 203 aaKnown RBP1.13□□□□□ -2.23
PRPF39-208ENST00000554785 SMARCD1Q96GM5 515 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 ANKRD36BP1Q96IX9 119 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 AKR1E2Q96JD6 320 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 BMFQ96LC9 184 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 SIGLEC12Q96PQ1 595 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 TMEM121Q9BTD3 319 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 PAXXQ9BUH6 204 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 CHMP4BQ9H444 224 aaKnown RBP1.13□□□□□ -2.23
PRPF39-208ENST00000554785 RHOJQ9H4E5 214 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 MIEF1Q9NQG6 463 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 SLC35D1Q9NTN3 355 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 Q9UF83 564 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 CRLS1Q9UJA2 301 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 CDH9Q9ULB4 789 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 VSIG4Q9Y279 399 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 L3MBTL1Q9Y468 752 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 AP1M2Q9Y6Q5 423 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 USF3Q68DE3 2245 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 ZNF407Q9C0G0 2248 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 MEGF8Q7Z7M0 2845 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 NCOA6Q14686 2063 aaPredicted RBP1.12□□□□□ -2.23
PRPF39-208ENST00000554785 ANKRD12Q6UB98 2062 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 IGLV3-10A0A075B6K4 115 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 A0A0U1RQS6 177 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 A0A1B0GWJ7 208 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 FAM168BA1KXE4 195 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 NKX2-6A6NCS4 301 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 SAGE2PA6NJ88 616 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 E9PLD3 99 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 CCL21O00585 134 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 POLR1CO15160 346 aaPredicted RBP1.12□□□□□ -2.23
PRPF39-208ENST00000554785 NUDT21O43809 227 aaKnown RBP1.12□□□□□ -2.23
PRPF39-208ENST00000554785 PEX11AO75192 247 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 GUCA1CO95843 209 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 FGF1P05230 155 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 HBQ1P09105 142 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 KRT13P13646 458 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 GCFC2P16383 781 aaKnown RBP1.12□□□□□ -2.23
PRPF39-208ENST00000554785 ATP5A1P25705 553 aaKnown RBP1.12□□□□□ -2.23
PRPF39-208ENST00000554785 PTBP1P26599 531 aaKnown RBP eCLIP1.12□□□□□ -2.233e-11■■■■■ 42.1
PRPF39-208ENST00000554785 HTR2AP28223 471 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 IL2RGP31785 369 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 CA5AP35218 305 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 ACAA2P42765 397 aaKnown RBP1.12□□□□□ -2.23
PRPF39-208ENST00000554785 MAGEA5P43359 124 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 MEOX2P50222 304 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 GFERP55789 205 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 KRTAP10-8P60410 259 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 RND3P61587 244 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 RPL32P62910 135 aaKnown RBP1.12□□□□□ -2.23
PRPF39-208ENST00000554785 CSNK1G2P78368 415 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 BDH1Q02338 343 aa1.12□□□□□ -2.23
PRPF39-208ENST00000554785 RGS1Q08116 209 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms