RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 M0R082 166 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 CHP2O43745 196 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 PRKYO43930 277 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 NTN1O95631 604 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 HRGP04196 525 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 GKN3PP0CG01 181 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 DBTP11182 482 aaKnown RBP11.04□□□□□ -0.64
SHMT2-214ENST00000554604 AGTR1P30556 359 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 ZNF91Q05481 1191 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 PRKCDQ05655 676 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 AQP6Q13520 282 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 TIGD6Q17RP2 521 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 ZNF620Q6ZNG0 422 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 BEND4Q6ZU67 534 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 FCRLAQ7L513 359 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 ZNF550Q7Z398 422 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 SLC43A2Q8N370 569 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 IQCF1Q8N6M8 205 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 LSMEM1Q8N8F7 131 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 OR8D4Q8NGM9 314 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 TMEM163Q8TC26 289 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 RNF128Q8TEB7 428 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 ABHD3Q8WU67 409 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 TMEM239Q8WW34 195 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 CNOT9Q92600 299 aaKnown RBP11.04□□□□□ -0.64
SHMT2-214ENST00000554604 ZNF524Q96C55 264 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 ZC3HAV1LQ96H79 300 aaKnown RBP11.04□□□□□ -0.64
SHMT2-214ENST00000554604 TMEM80Q96HE8 168 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 SLC38A2Q96QD8 506 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 OR5B2Q96R09 309 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 SRXN1Q9BYN0 137 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 PLA2G12AQ9BZM1 189 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 EGLN3Q9H6Z9 239 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 TBC1D23Q9NUY8 699 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 MRPS18AQ9NVS2 196 aaKnown RBP11.04□□□□□ -0.64
SHMT2-214ENST00000554604 DNAJC27Q9NZQ0 273 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 SPIN1Q9Y657 262 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-214ENST00000554604 CDH10Q9Y6N8 788 aa11.04□□□□□ -0.64
SHMT2-214ENST00000554604 A0A0B4J2E0 115 aa11.03□□□□□ -0.64
SHMT2-214ENST00000554604 A0A1B0GX12 115 aa11.03□□□□□ -0.64
SHMT2-214ENST00000554604 SNTNA6NMZ2 147 aa11.03□□□□□ -0.64
SHMT2-214ENST00000554604 ETV2O00321 342 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-214ENST00000554604 TLX2O43763 284 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-214ENST00000554604 PIP5K1CO60331 668 aa11.03□□□□□ -0.64
SHMT2-214ENST00000554604 PTHP01270 115 aa11.03□□□□□ -0.64
SHMT2-214ENST00000554604 RAF1P04049 648 aa11.03□□□□□ -0.64
SHMT2-214ENST00000554604 TFPIP10646 304 aa11.03□□□□□ -0.64
SHMT2-214ENST00000554604 CD36P16671 472 aa11.03□□□□□ -0.64
SHMT2-214ENST00000554604 ZNF182P17025 639 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-214ENST00000554604 CCKARP32238 428 aa11.03□□□□□ -0.64
SHMT2-214ENST00000554604 APOBEC1P41238 236 aaKnown RBP11.03□□□□□ -0.64
SHMT2-214ENST00000554604 RBM34P42696 430 aaKnown RBP11.03□□□□□ -0.64
SHMT2-214ENST00000554604 ACAA2P42765 397 aaKnown RBP11.03□□□□□ -0.64
SHMT2-214ENST00000554604 GPR4P46093 362 aa11.03□□□□□ -0.64
SHMT2-214ENST00000554604 RAC3P60763 192 aa11.03□□□□□ -0.64
SHMT2-214ENST00000554604 SPCS2Q15005 226 aa11.03□□□□□ -0.64
SHMT2-214ENST00000554604 SNAPC1Q16533 368 aa11.03□□□□□ -0.64
SHMT2-214ENST00000554604 SYT14P1Q58G82 188 aa11.03□□□□□ -0.64
SHMT2-214ENST00000554604 RPL13AP3Q6NVV1 102 aa11.03□□□□□ -0.64
SHMT2-214ENST00000554604 PAMR1Q6UXH9 720 aa11.03□□□□□ -0.64
SHMT2-214ENST00000554604 LINC00299Q6ZSB3 139 aa11.03□□□□□ -0.64
SHMT2-214ENST00000554604 TMPRSS11FQ6ZWK6 438 aa11.03□□□□□ -0.64
SHMT2-214ENST00000554604 SLC46A3Q7Z3Q1 461 aa11.03□□□□□ -0.64
SHMT2-214ENST00000554604 ZNF440Q8IYI8 595 aa11.03□□□□□ -0.64
SHMT2-214ENST00000554604 FAM71CQ8NEG0 241 aa11.03□□□□□ -0.64
SHMT2-214ENST00000554604 SLC25A43Q8WUT9 341 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-214ENST00000554604 ZNF582Q96NG8 517 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-214ENST00000554604 FOXC2Q99958 501 aa11.03□□□□□ -0.64
SHMT2-214ENST00000554604 TSSK6Q9BXA6 273 aa11.03□□□□□ -0.64
SHMT2-214ENST00000554604 GP6Q9HCN6 339 aa11.03□□□□□ -0.64
SHMT2-214ENST00000554604 KLHL13Q9P2N7 655 aa11.03□□□□□ -0.64
SHMT2-214ENST00000554604 MED31Q9Y3C7 131 aa11.03□□□□□ -0.64
SHMT2-214ENST00000554604 IGHV3-15A0A0B4J1V0 119 aa11.02□□□□□ -0.65
SHMT2-214ENST00000554604 UNC119BA6NIH7 251 aa11.02□□□□□ -0.65
SHMT2-214ENST00000554604 SULT2B1O00204 365 aa11.02□□□□□ -0.65
SHMT2-214ENST00000554604 PRODHO43272 600 aa11.02□□□□□ -0.65
SHMT2-214ENST00000554604 HMGN1P05114 100 aa11.02□□□□□ -0.65
SHMT2-214ENST00000554604 YES1P07947 543 aa11.02□□□□□ -0.65
SHMT2-214ENST00000554604 PPP3CBP16298 524 aa11.02□□□□□ -0.65
SHMT2-214ENST00000554604 ENPP1P22413 925 aa11.02□□□□□ -0.65
SHMT2-214ENST00000554604 CRYGSP22914 178 aa11.02□□□□□ -0.65
SHMT2-214ENST00000554604 GRK5P34947 590 aa11.02□□□□□ -0.65
SHMT2-214ENST00000554604 LIPAP38571 399 aa11.02□□□□□ -0.65
SHMT2-214ENST00000554604 CSNK2A1P68400 391 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-214ENST00000554604 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.02□□□□□ -0.65
SHMT2-214ENST00000554604 PGGHGQ32M88 737 aa11.02□□□□□ -0.65
SHMT2-214ENST00000554604 KLHL22Q53GT1 634 aa11.02□□□□□ -0.65
SHMT2-214ENST00000554604 WDR88Q6ZMY6 472 aa11.02□□□□□ -0.65
SHMT2-214ENST00000554604 TUSC5Q8IXB3 177 aa11.02□□□□□ -0.65
SHMT2-214ENST00000554604 CDK20Q8IZL9 346 aa11.02□□□□□ -0.65
SHMT2-214ENST00000554604 OR4Q3Q8NH05 313 aa11.02□□□□□ -0.65
SHMT2-214ENST00000554604 TBC1D15Q8TC07 691 aa11.02□□□□□ -0.65
SHMT2-214ENST00000554604 PIK3IP1Q96FE7 263 aa11.02□□□□□ -0.65
SHMT2-214ENST00000554604 LRR1Q96L50 414 aa11.02□□□□□ -0.65
SHMT2-214ENST00000554604 ZNF426Q9BUY5 554 aa11.02□□□□□ -0.65
SHMT2-214ENST00000554604 PLEKHF2Q9H8W4 249 aa11.02□□□□□ -0.65
SHMT2-214ENST00000554604 FGF20Q9NP95 211 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-214ENST00000554604 EXOSC3Q9NQT5 275 aaKnown RBP11.02□□□□□ -0.65
SHMT2-214ENST00000554604 KLHL9Q9P2J3 617 aa11.02□□□□□ -0.65
SHMT2-214ENST00000554604 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms