RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 C12orf56Q8IXR9 622 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 SLC7A5P1Q8MH63 180 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 CADM2Q8N3J6 435 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 TTC29Q8NA56 475 aaPredicted RBP3.61□□□□□ -1.83
SCFD1-211ENST00000554437 ANKRD7Q92527 254 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 LRRC45Q96CN5 670 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 CCDC126Q96EE4 140 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 C9orf72Q96LT7 481 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 ATP5SQ99766 215 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 PELOQ9BRX2 385 aaKnown RBP3.61□□□□□ -1.83
SCFD1-211ENST00000554437 SLC35A5Q9BS91 424 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 UPF3BQ9BZI7 483 aaKnown RBP3.61□□□□□ -1.83
SCFD1-211ENST00000554437 GLIPR2Q9H4G4 154 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 TMEM165Q9HC07 324 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 MEPEQ9NQ76 525 aaPredicted RBP3.61□□□□□ -1.83
SCFD1-211ENST00000554437 MS4A12Q9NXJ0 267 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 DDX19BQ9UMR2 479 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 POFUT2Q9Y2G5 429 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 USP16Q9Y5T5 823 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 ATRXP46100 2492 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 NSG1A0A0A6YYJ2 146 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 CENPXA8MT69 81 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 FAM220BPB1ANY3 271 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 H3BMQ9 156 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 GOLGA8RI6L899 631 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 NDUFAB1O14561 156 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 RFXANKO14593 260 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 ZBTB5O15062 677 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 RAMP1O60894 148 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 SCN2BO60939 215 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 HLA-HP01893 362 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 IFNW1P05000 195 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 NR2C1P13056 603 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 RNH1P13489 461 aaKnown RBP3.6□□□□□ -1.83
SCFD1-211ENST00000554437 ABOP16442 354 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 IGHV1-2P23083 117 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 SLC26A3P40879 764 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 OPRD1P41143 372 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 NSG1P42857 185 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 TMED10P49755 219 aaKnown RBP3.6□□□□□ -1.83
SCFD1-211ENST00000554437 HSPA2P54652 639 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 SCRN3Q0VDG4 424 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 PMS2P3Q13401 168 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 DGCR6Q14129 220 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 NDUFA9Q16795 377 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 TRIM16LQ309B1 348 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 EOGTQ5NDL2 527 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 FAM122BQ7Z309 247 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 SLC26A11Q86WA9 606 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 IFNEQ86WN2 208 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 ZNF677Q86XU0 584 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 OR2L13Q8N349 312 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 RNF10Q8N5U6 811 aaKnown RBP3.6□□□□□ -1.83
SCFD1-211ENST00000554437 CSNK1A1LQ8N752 337 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 Q8N7P7 452 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 TPRX1Q8N7U7 411 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 OR52H1Q8NGJ2 320 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 TCP10LQ8TDR4 215 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 HTR3CQ8WXA8 447 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 STMN2Q93045 179 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 OR5B2Q96R09 309 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 RNF2Q99496 336 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 KIR2DL4Q99706 377 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 TM2D1Q9BX74 207 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 OR51M1Q9H341 326 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 UCK1Q9HA47 277 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 PDFQ9HBH1 243 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 TMCO1Q9UM00 188 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 PPIL1Q9Y3C6 166 aa3.6□□□□□ -1.83
SCFD1-211ENST00000554437 UNC13AQ9UPW8 1703 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 IGLV8-61A0A075B6I0 122 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 TCRBV9S1A1TA0A576 114 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 PRSS37A4D1T9 235 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 E7EWF7 191 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 F8VZ95 297 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 HDAC3O15379 428 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 CXCL13O43927 109 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 GMDSO60547 372 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 UGT2B17O75795 530 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 MYO1DO94832 1006 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 LYPD3O95274 346 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 ZNF853P0CG23 659 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 UCNP55089 124 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 PKNOX1P55347 436 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 MRPS22P82650 360 aaKnown RBP3.59□□□□□ -1.83
SCFD1-211ENST00000554437 ITGB3BPQ13352 177 aaPredicted RBP3.59□□□□□ -1.83
SCFD1-211ENST00000554437 ORC2Q13416 577 aaPredicted RBP3.59□□□□□ -1.83
SCFD1-211ENST00000554437 PIGHQ14442 188 aaPredicted RBP3.59□□□□□ -1.83
SCFD1-211ENST00000554437 DUSP7Q16829 419 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 SOHLH1Q5JUK2 328 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 PPM1LQ5SGD2 360 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 STAC2Q6ZMT1 411 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 Q6ZSR3 168 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 ZNF100Q8IYN0 542 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 IQCKQ8N0W5 287 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 MTURNQ8N3F0 131 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 BPIFB2Q8N4F0 458 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 IL1F10Q8WWZ1 152 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 ECHDC3Q96DC8 303 aa3.59□□□□□ -1.83
SCFD1-211ENST00000554437 MAGEB18Q96M61 343 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms