RNA–Protein interactions for RNA: ENST00000554315.5

NUMB-209, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best)

Gene NUMB, Length 1,740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-209ENST00000554315 FAIMQ9NVQ4 179 aa12.04□□□□□ -0.48
NUMB-209ENST00000554315 BEX4Q9NWD9 120 aaPredicted RBP12.04□□□□□ -0.48
NUMB-209ENST00000554315 CISD1Q9NZ45 108 aaKnown RBP12.04□□□□□ -0.48
NUMB-209ENST00000554315 NPAP1Q9NZP6 1156 aa12.04□□□□□ -0.48
NUMB-209ENST00000554315 POU2F3Q9UKI9 436 aa12.04□□□□□ -0.48
NUMB-209ENST00000554315 FBXL3Q9UKT7 428 aa12.04□□□□□ -0.48
NUMB-209ENST00000554315 LRBAP50851 2863 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 VSTM5A8MXK1 200 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 CDC42EP2O14613 210 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 PLAUP00749 431 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 CRYAAP02489 173 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 SEC23BQ15437 767 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 DPY19L2P2Q6ZN68 376 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 ZER1Q7Z7L7 766 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 MEX3DQ86XN8 651 aaKnown RBP12.03□□□□□ -0.48
NUMB-209ENST00000554315 LRRC75AQ8NAA5 344 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 NOXO1Q8NFA2 376 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 SLC38A2Q96QD8 506 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 REEP1Q9H902 201 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 CRNNQ9UBG3 495 aaPredicted RBP12.03□□□□□ -0.48
NUMB-209ENST00000554315 SIGLEC7Q9Y286 467 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 ALPK2Q86TB3 2170 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 DHRS12A0PJE2 317 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 UBL3O95164 117 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 CD53P19397 219 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 NPR2P20594 1047 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 FPR3P25089 353 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 LIMS1P48059 325 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 ZNF133P52736 654 aaPredicted RBP12.03□□□□□ -0.48
NUMB-209ENST00000554315 CD47Q08722 323 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 TOP3AQ13472 1001 aaPredicted RBP12.03□□□□□ -0.48
NUMB-209ENST00000554315 FHL1Q13642 323 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 DEFB113Q30KQ7 82 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 OR2T5Q6IEZ7 315 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 C1orf94Q6P1W5 598 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 SMARCD3Q6STE5 483 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 SPATA24Q86W54 205 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 SLC22A24Q8N4F4 322 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 OR2T29Q8NH02 315 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 TMEM171Q8WVE6 324 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 RSRC1Q96IZ7 334 aaKnown RBP12.03□□□□□ -0.48
NUMB-209ENST00000554315 CCL19Q99731 98 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 KATNB1Q9BVA0 655 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 CHID1Q9BWS9 393 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 CADM1Q9BY67 442 aaKnown RBP12.03□□□□□ -0.48
NUMB-209ENST00000554315 POMPQ9Y244 141 aa12.03□□□□□ -0.48
NUMB-209ENST00000554315 GNGT2O14610 69 aa12.02□□□□□ -0.49
NUMB-209ENST00000554315 ARHGEF9O43307 516 aa12.02□□□□□ -0.49
NUMB-209ENST00000554315 CCNB2O95067 398 aa12.02□□□□□ -0.49
NUMB-209ENST00000554315 IGKV3-15P01624 115 aa12.02□□□□□ -0.49
NUMB-209ENST00000554315 CD79AP11912 226 aa12.02□□□□□ -0.49
NUMB-209ENST00000554315 RPS6KA3P51812 740 aa12.02□□□□□ -0.49
NUMB-209ENST00000554315 ART1P52961 327 aa12.02□□□□□ -0.49
NUMB-209ENST00000554315 ERVK-25P63136 954 aa12.02□□□□□ -0.49
NUMB-209ENST00000554315 RUNX1T1Q06455 604 aa12.02□□□□□ -0.49
NUMB-209ENST00000554315 GSG1Q2KHT4 349 aa12.02□□□□□ -0.49
NUMB-209ENST00000554315 RFX4Q33E94 735 aa12.02□□□□□ -0.49
NUMB-209ENST00000554315 C10orf128Q5T292 105 aa12.02□□□□□ -0.49
NUMB-209ENST00000554315 SMAP2Q8WU79 429 aaPredicted RBP12.02□□□□□ -0.49
NUMB-209ENST00000554315 KCNK17Q96T54 332 aa12.02□□□□□ -0.49
NUMB-209ENST00000554315 NELFAQ9H3P2 528 aa12.02□□□□□ -0.49
NUMB-209ENST00000554315 CXorf56Q9H5V9 222 aa12.02□□□□□ -0.49
NUMB-209ENST00000554315 TMEM38BQ9NVV0 291 aa12.02□□□□□ -0.49
NUMB-209ENST00000554315 LYVE1Q9Y5Y7 322 aa12.02□□□□□ -0.49
NUMB-209ENST00000554315 PDZD2O15018 2839 aa12.02□□□□□ -0.49
NUMB-209ENST00000554315 SHISA9B4DS77 424 aa12.01□□□□□ -0.49
NUMB-209ENST00000554315 SMPD2O60906 423 aa12.01□□□□□ -0.49
NUMB-209ENST00000554315 CST1P01037 141 aa12.01□□□□□ -0.49
NUMB-209ENST00000554315 PTHP01270 115 aa12.01□□□□□ -0.49
NUMB-209ENST00000554315 APEHP13798 732 aaKnown RBP12.01□□□□□ -0.49
NUMB-209ENST00000554315 B4GALT1P15291 398 aa12.01□□□□□ -0.49
NUMB-209ENST00000554315 SLC6A6P31641 620 aa12.01□□□□□ -0.49
NUMB-209ENST00000554315 RAB1AP62820 205 aa12.01□□□□□ -0.49
NUMB-209ENST00000554315 TSPAN31Q12999 210 aa12.01□□□□□ -0.49
NUMB-209ENST00000554315 SLC36A2Q495M3 483 aa12.01□□□□□ -0.49
NUMB-209ENST00000554315 RPL13AP3Q6NVV1 102 aa12.01□□□□□ -0.49
NUMB-209ENST00000554315 IGFN1Q86VF2 1251 aa12.01□□□□□ -0.49
NUMB-209ENST00000554315 WDFY1Q8IWB7 410 aa12.01□□□□□ -0.49
NUMB-209ENST00000554315 OR4F15Q8NGB8 312 aa12.01□□□□□ -0.49
NUMB-209ENST00000554315 LILRB1Q8NHL6 650 aaPredicted RBP12.01□□□□□ -0.49
NUMB-209ENST00000554315 CANT1Q8WVQ1 401 aa12.01□□□□□ -0.49
NUMB-209ENST00000554315 HDAC2Q92769 488 aaKnown RBP12.01□□□□□ -0.49
NUMB-209ENST00000554315 GPX7Q96SL4 187 aaPredicted RBP12.01□□□□□ -0.49
NUMB-209ENST00000554315 SIAEQ9HAT2 523 aa12.01□□□□□ -0.49
NUMB-209ENST00000554315 NRIP3Q9NQ35 241 aa12.01□□□□□ -0.49
NUMB-209ENST00000554315 B3GNT2Q9NY97 397 aa12.01□□□□□ -0.49
NUMB-209ENST00000554315 SAMHD1Q9Y3Z3 626 aaKnown RBP12.01□□□□□ -0.49
NUMB-209ENST00000554315 ATP23Q9Y6H3 246 aa12.01□□□□□ -0.49
NUMB-209ENST00000554315 IGHV1-18A0A0C4DH31 117 aa12□□□□□ -0.49
NUMB-209ENST00000554315 IMPA2O14732 288 aa12□□□□□ -0.49
NUMB-209ENST00000554315 IDH3BO43837 385 aa12□□□□□ -0.49
NUMB-209ENST00000554315 RAB36O95755 333 aa12□□□□□ -0.49
NUMB-209ENST00000554315 IGLV1-44P01699 117 aa12□□□□□ -0.49
NUMB-209ENST00000554315 BMP4P12644 408 aa12□□□□□ -0.49
NUMB-209ENST00000554315 SDHAP31040 664 aa12□□□□□ -0.49
NUMB-209ENST00000554315 CDH11P55287 796 aa12□□□□□ -0.49
NUMB-209ENST00000554315 MYBPC1Q00872 1141 aa12□□□□□ -0.49
NUMB-209ENST00000554315 MICAQ29983 383 aa12□□□□□ -0.49
NUMB-209ENST00000554315 AGAP6Q5VW22 663 aa12□□□□□ -0.49
NUMB-209ENST00000554315 ZNF544Q6NX49 715 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms