RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 CAPZA2P47755 286 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 CSNK1A1P48729 337 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 RASSF2P50749 326 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 GZMMP51124 257 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 CHN2P52757 468 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 MTPNP58546 118 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 RPS23P62266 143 aaKnown RBP5.7□□□□□ -1.5
SLIRP-203ENST00000554074 MRPS11P82912 194 aaKnown RBP5.7□□□□□ -1.5
SLIRP-203ENST00000554074 CAMK2DQ13557 499 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 RIN1Q13671 783 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 NPTX1Q15818 432 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 FXNQ16595 210 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 ENTPD8Q5MY95 495 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 CARD17Q5XLA6 110 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 C8orf82Q6P1X6 216 aaPredicted RBP5.7□□□□□ -1.5
SLIRP-203ENST00000554074 TTC33Q6PID6 262 aaPredicted RBP5.7□□□□□ -1.5
SLIRP-203ENST00000554074 WDR88Q6ZMY6 472 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 TREML1Q86YW5 311 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 PHC2Q8IXK0 858 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 PGAM4Q8N0Y7 254 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 SVOPLQ8N434 492 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 FITM2Q8N6M3 262 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 C10orf53Q8N6V4 93 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 SMYD1Q8NB12 490 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 OR6N1Q8NGY5 312 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 ADAMTS16Q8TE57 1224 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 UBASH3BQ8TF42 649 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 RCN3Q96D15 328 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 MSI2Q96DH6 328 aaKnown RBP5.7□□□□□ -1.5
SLIRP-203ENST00000554074 SLC25A44Q96H78 314 aaPredicted RBP5.7□□□□□ -1.5
SLIRP-203ENST00000554074 SEPHS2Q99611 448 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 POLR2J2Q9GZM3 115 aaKnown RBP5.7□□□□□ -1.5
SLIRP-203ENST00000554074 POLR2J3Q9H1A7 115 aaKnown RBP5.7□□□□□ -1.5
SLIRP-203ENST00000554074 MS4A5Q9H3V2 200 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 DYNLRB1Q9NP97 96 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 SPAG4Q9NPE6 437 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 NANSQ9NR45 359 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 TAS2R5Q9NYW4 299 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 GLTPQ9NZD2 209 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 ABCD2Q9UBJ2 740 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 SLC7A8Q9UHI5 535 aa5.7□□□□□ -1.5
SLIRP-203ENST00000554074 SLC22A23A1A5C7 686 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 HTR3EA5X5Y0 456 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 NPIPB13A6NJU9 1138 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 CPSF4LA6NMK7 179 aaKnown RBP5.69□□□□□ -1.5
SLIRP-203ENST00000554074 FAM220BPB1ANY3 271 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 NPIPB4C9JG80 1138 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 LRRN3E7EW58 273 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 M0R233 179 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 LILRA1O75019 489 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 SEC14L2O76054 403 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 FARS2O95363 451 aaKnown RBP5.69□□□□□ -1.5
SLIRP-203ENST00000554074 RAB36O95755 333 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 CH25HO95992 272 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 TGFAP01135 160 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 OPN1SWP03999 348 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 THY1P04216 161 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 HIST1H2ABP04908 130 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 SERPINA5P05154 406 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 TSPAN19P0C672 248 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 PGA4P0DJD7 388 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 PGA3P0DJD8 388 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 OR8G3PP0DMU2 310 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 THRBP10828 461 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 SRD5A1P18405 259 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 RBM34P42696 430 aaKnown RBP5.69□□□□□ -1.5
SLIRP-203ENST00000554074 GIPRP48546 466 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 PTDSS1P48651 473 aaKnown RBP5.69□□□□□ -1.5
SLIRP-203ENST00000554074 NUDT2P50583 147 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 ZNF133P52736 654 aaPredicted RBP5.69□□□□□ -1.5
SLIRP-203ENST00000554074 CRYBA2P53672 197 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 BIDP55957 195 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 RAB1AP62820 205 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 GALK2Q01415 458 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 SF3A3Q12874 501 aaKnown RBP eCLIP5.69□□□□□ -1.5
SLIRP-203ENST00000554074 SELPLGQ14242 412 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 HIST3H3Q16695 136 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 VMACQ2NL98 169 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 IQCCQ4KMZ1 466 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 SAMD4BQ5PRF9 694 aaKnown RBP5.69□□□□□ -1.5
SLIRP-203ENST00000554074 FAM120AOSQ5T036 256 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 KRT80Q6KB66 452 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 LRFN4Q6PJG9 635 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 SLC35D2Q76EJ3 337 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 HIST3H2AQ7L7L0 130 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 HDDC2Q7Z4H3 204 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 CALHM3Q86XJ0 350 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 WDFY1Q8IWB7 410 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 SKA3Q8IX90 412 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 CDK20Q8IZL9 346 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 SLC22A24Q8N4F4 322 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 POU5F2Q8N7G0 328 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 OR4D11Q8NGI4 311 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 OR10A6Q8NH74 314 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 SLC26A7Q8TE54 656 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 LIPHQ8WWY8 451 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 HIST1H2ACQ93077 130 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 ZNF566Q969W8 418 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 TAMM41Q96BW9 452 aa5.69□□□□□ -1.5
SLIRP-203ENST00000554074 MRPL37Q9BZE1 423 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms