RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 HIF1ANQ9NWT6 349 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 PAQR5Q9NXK6 330 aaPredicted RBP2.67□□□□□ -1.98
SLIRP-202ENST00000553981 TAS2R16Q9NYV7 291 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 TREM2Q9NZC2 230 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 ARMCX1Q9P291 453 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 KLHL9Q9P2J3 617 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 POU2F3Q9UKI9 436 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 PSME2Q9UL46 239 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 MKLN1Q9UL63 735 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 GRID1Q9ULK0 1009 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 SNX6Q9UNH7 406 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 NOSIPQ9Y314 301 aaKnown RBP2.67□□□□□ -1.98
SLIRP-202ENST00000553981 PPIAL4AQ9Y536 164 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 HUWE1Q7Z6Z7 4374 aaKnown RBP2.67□□□□□ -1.98
SLIRP-202ENST00000553981 BIRC6Q9NR09 4857 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 DYNC2H1Q8NCM8 4307 aaKnown RBP2.66□□□□□ -1.98
SLIRP-202ENST00000553981 IGHV2OR16-5A0A0B4J2B6 119 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 MDFIC2A0A1B0GVS7 189 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 CIB4A0PJX0 185 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 CCT8L1PA6NM43 557 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 hCG_2039718K7EN88 272 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 NDUFS8O00217 210 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 GUCY1B2O75343 617 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 SKAP2O75563 359 aaPredicted RBP2.66□□□□□ -1.98
SLIRP-202ENST00000553981 SEC14L2O76054 403 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF432O94892 652 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 INMTO95050 263 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 AKR7A3O95154 331 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 CLPTM1O96005 669 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 IGKV3-15P01624 115 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 CHRM4P08173 479 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 ADRA2AP08913 450 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 ACAA1P09110 424 aaPredicted RBP2.66□□□□□ -1.98
SLIRP-202ENST00000553981 RBP1P09455 135 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 ALOX5P09917 674 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 LINC00032P0C843 101 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 PATE4P0C8F1 98 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 UBTFL6P0CB48 400 aaPredicted RBP2.66□□□□□ -1.98
SLIRP-202ENST00000553981 PRG2P13727 222 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 DAOP14920 347 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 CDH2P19022 906 aaPredicted RBP2.66□□□□□ -1.98
SLIRP-202ENST00000553981 MDKP21741 143 aaPredicted RBP2.66□□□□□ -1.98
SLIRP-202ENST00000553981 HMOX2P30519 316 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 STX2P32856 288 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 SERPINF1P36955 418 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 ALDH3B1P43353 468 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 MAGEB1P43366 347 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 PPOXP50336 477 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF84P51523 738 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 IDH3GP51553 393 aaPredicted RBP2.66□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF41P51814 821 aaPredicted RBP2.66□□□□□ -1.98
SLIRP-202ENST00000553981 SEC61A1P61619 476 aaKnown RBP2.66□□□□□ -1.98
SLIRP-202ENST00000553981 UBA52P62987 128 aaKnown RBP2.66□□□□□ -1.98
SLIRP-202ENST00000553981 HBA1P69905 142 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 EGR4Q05215 589 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 ZP4Q12836 540 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 NAB1Q13506 487 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 RASA2Q15283 850 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 GPR68Q15743 365 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF141Q15928 474 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 ALKBH6Q3KRA9 238 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 IQCCQ4KMZ1 466 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 SPIN4Q56A73 249 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 SYT14P1Q58G82 188 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 AVPI1Q5T686 147 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 LIPNQ5VXI9 398 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 EMBQ6PCB8 327 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 FRRS1Q6ZNA5 592 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 TIFABQ6ZNK6 161 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 SPATA19Q7Z5L4 167 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 MTERF4Q7Z6M4 381 aaKnown RBP2.66□□□□□ -1.98
SLIRP-202ENST00000553981 GALNT5Q7Z7M9 940 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 MDP1Q86V88 176 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 P2RY8Q86VZ1 359 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF584Q8IVC4 421 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 RIMKLAQ8IXN7 391 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF100Q8IYN0 542 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 UBE2J2Q8N2K1 259 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 SLC43A2Q8N370 569 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF786Q8N393 782 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 PAQR4Q8N4S7 273 aaPredicted RBP2.66□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF614Q8N883 585 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 NOA1Q8NC60 698 aaKnown RBP2.66□□□□□ -1.98
SLIRP-202ENST00000553981 OR6Y1Q8NGX8 325 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 RAB8BQ92930 207 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 TMEM186Q96B77 213 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 MUCL1Q96DR8 90 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 AURKBQ96GD4 344 aaPredicted RBP2.66□□□□□ -1.98
SLIRP-202ENST00000553981 MS4A4EQ96PG1 132 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 ALKBH3Q96Q83 286 aaPredicted RBP2.66□□□□□ -1.98
SLIRP-202ENST00000553981 STACQ99469 402 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 TXLNGYQ9BZA5 131 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF350Q9GZX5 532 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 REEP4Q9H6H4 257 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 AAMDCQ9H7C9 122 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF696Q9H7X3 374 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 NGBQ9NPG2 151 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 MMP26Q9NRE1 261 aa2.66□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF275Q9NSD4 429 aaPredicted RBP2.66□□□□□ -1.98
SLIRP-202ENST00000553981 ACSS1Q9NUB1 689 aaPredicted RBP2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms