RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 MED29Q9NX70 200 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 B3GAT1Q9P2W7 334 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 CD300AQ9UGN4 299 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 PLEKHA6Q9Y2H5 1048 aa7.32□□□□□ -1.24
PSEN1-209ENST00000553855 PKDREJQ9NTG1 2253 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 A0A1W2PR80 420 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 A0A1W2PRQ8 180 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 VSTM5A8MXK1 200 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 DEFB108AA8MXU0 73 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 ZNF99A8MXY4 864 aaPredicted RBP7.31□□□□□ -1.24
PSEN1-209ENST00000553855 RPL36A-HNRNPH2H7BZ11 118 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 XKRYO14609 159 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 UPK3AO75631 287 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 ZNF432O94892 652 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 FARS2O95363 451 aaKnown RBP7.31□□□□□ -1.24
PSEN1-209ENST00000553855 HPRP00739 348 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 F13BP05160 661 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 HLA-DOBP13765 273 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 HOXB6P17509 224 aaKnown RBP7.31□□□□□ -1.24
PSEN1-209ENST00000553855 EDNRAP25101 427 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 RRM2P31350 389 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 AQP2P41181 271 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 RIPPLY3P57055 190 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 ARF1P84077 181 aaKnown RBP7.31□□□□□ -1.24
PSEN1-209ENST00000553855 PRKCDQ05655 676 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 RPL18Q07020 188 aaKnown RBP7.31□□□□□ -1.24
PSEN1-209ENST00000553855 DGCR6Q14129 220 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 TRIM25Q14258 630 aaKnown RBP7.31□□□□□ -1.24
PSEN1-209ENST00000553855 MELKQ14680 651 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 CEACAM16Q2WEN9 425 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 TBRG1Q3YBR2 411 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 NCMAPQ5T1S8 102 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 FAM205BPQ63HN1 556 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 SLC22A25Q6T423 547 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 PAMR1Q6UXH9 720 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 CYP2R1Q6VVX0 501 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 SLC46A3Q7Z3Q1 461 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 ZDHHC21Q8IVQ6 265 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 C20orf196Q8IYI0 205 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 LRRC17Q8N6Y2 441 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 FNDC8Q8TC99 324 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 MAGEE2Q8TD90 523 aaPredicted RBP7.31□□□□□ -1.24
PSEN1-209ENST00000553855 TMEM171Q8WVE6 324 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 LIPHQ8WWY8 451 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 AKAP1Q92667 903 aaKnown RBP eCLIP7.31□□□□□ -1.24
PSEN1-209ENST00000553855 FBXW5Q969U6 566 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 CCDC124Q96CT7 223 aaKnown RBP7.31□□□□□ -1.24
PSEN1-209ENST00000553855 ASB9Q96DX5 294 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 SLC25A44Q96H78 314 aaPredicted RBP7.31□□□□□ -1.24
PSEN1-209ENST00000553855 TXNDC15Q96J42 360 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 RBP7Q96R05 134 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 SEPHS2Q99611 448 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 CCL19Q99731 98 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 KCNN2Q9H2S1 579 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 YY1AP1Q9H869 796 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 GPR35Q9HC97 309 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 MEPEQ9NQ76 525 aaPredicted RBP7.31□□□□□ -1.24
PSEN1-209ENST00000553855 GLTPQ9NZD2 209 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 NDUFAF4Q9P032 175 aa7.31□□□□□ -1.24
PSEN1-209ENST00000553855 ANKHD1Q8IWZ3 2542 aaKnown RBP7.31□□□□□ -1.24
PSEN1-209ENST00000553855 A0A087WUU8 490 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 A6NIZ1 184 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 CENPBD1B2RD01 187 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 PDLIM1O00151 329 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 ABCD4O14678 606 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 HS3ST1O14792 307 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 ARHGEF9O43307 516 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 PIP5K1CO60331 668 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 OR10H3O60404 316 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 SMPD2O60906 423 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 TMCC2O75069 709 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 KRT36O76013 467 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 PDE5AO76074 875 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 RAB36O95755 333 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 SCGB1D2O95969 90 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 CRYAAP02489 173 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 ART1P52961 327 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 RAP1BP61224 184 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 RAP1AP62834 184 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 VLDLRP98155 873 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 BSPH1Q075Z2 132 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 CD47Q08722 323 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 TRAP1Q12931 704 aaKnown RBP7.3□□□□□ -1.24
PSEN1-209ENST00000553855 TOP3AQ13472 1001 aaPredicted RBP7.3□□□□□ -1.24
PSEN1-209ENST00000553855 HIKESHIQ53FT3 197 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 TMEM177Q53S58 311 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 PODNL1Q6PEZ8 512 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 ZNF813Q6ZN06 617 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 TSPYL5Q86VY4 417 aaPredicted RBP7.3□□□□□ -1.24
PSEN1-209ENST00000553855 LINC00471Q8N535 108 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 OR52J3Q8NH60 311 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 OR51A7Q8NH64 312 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 FOXB1Q99853 325 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 BTBD10Q9BSF8 475 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 SSBP4Q9BWG4 385 aaPredicted RBP7.3□□□□□ -1.24
PSEN1-209ENST00000553855 C1QTNF6Q9BXI9 259 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 CXorf56Q9H5V9 222 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 MAGIXQ9H6Y5 334 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 PLEKHF2Q9H8W4 249 aa7.3□□□□□ -1.24
PSEN1-209ENST00000553855 IL1RAPQ9NPH3 570 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms