RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 TMPRSS11FQ6ZWK6 438 aa11.16□□□□□ -0.62
SHMT2-207ENST00000553837 RNF113BQ8IZP6 322 aaKnown RBP11.16□□□□□ -0.62
SHMT2-207ENST00000553837 SVBPQ8N300 66 aa11.16□□□□□ -0.62
SHMT2-207ENST00000553837 ZNF614Q8N883 585 aa11.16□□□□□ -0.62
SHMT2-207ENST00000553837 OR51A7Q8NH64 312 aa11.16□□□□□ -0.62
SHMT2-207ENST00000553837 LGALS14Q8TCE9 139 aa11.16□□□□□ -0.62
SHMT2-207ENST00000553837 ASB13Q8WXK3 278 aa11.16□□□□□ -0.62
SHMT2-207ENST00000553837 GTF3AQ92664 365 aaKnown RBP11.16□□□□□ -0.62
SHMT2-207ENST00000553837 C4orf36Q96KX1 117 aa11.16□□□□□ -0.62
SHMT2-207ENST00000553837 TMEM68Q96MH6 324 aa11.16□□□□□ -0.62
SHMT2-207ENST00000553837 OR1F2PQ96R84 312 aa11.16□□□□□ -0.62
SHMT2-207ENST00000553837 TSNAXQ99598 290 aaKnown RBP11.16□□□□□ -0.62
SHMT2-207ENST00000553837 CCDC3Q9BQI4 270 aa11.16□□□□□ -0.62
SHMT2-207ENST00000553837 TAS2R10Q9NYW0 307 aa11.16□□□□□ -0.62
SHMT2-207ENST00000553837 MYEF2Q9P2K5 600 aaKnown RBP11.16□□□□□ -0.62
SHMT2-207ENST00000553837 SPACA6W5XKT8 324 aa11.16□□□□□ -0.62
SHMT2-207ENST00000553837 A0A0B4J2E0 115 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 KIR2DS5A0A0G2JLQ3 304 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 A0A0G2JNG1 304 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 A0A1B0GWA3 101 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 A0A1B0GX12 115 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 FAM221BA6H8Z2 402 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 KIR2DS3K7RE56 304 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 FOXS1O43638 330 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 FMO6PO60774 539 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 SLC35E2P0CK97 266 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 ZNF35P13682 527 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 CNR1P21554 472 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 H2BFSP57053 126 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 HHEXQ03014 270 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 KIR2DS5Q14953 304 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 MPPED2Q15777 294 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 MANEAQ5SRI9 462 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 NPSR1Q6W5P4 371 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 MOB3CQ70IA8 216 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 FAM160A2Q8N612 972 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-207ENST00000553837 CYB561A3Q8NBI2 242 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 SMRP1Q8NCR6 262 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 DNAAF1Q8NEP3 725 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 DMBX1Q8NFW5 382 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 OR5M1Q8NGP8 315 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 PIGMQ9H3S5 423 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 KRCC1Q9NPI7 259 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-207ENST00000553837 NIT2Q9NQR4 276 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 GPR27Q9NS67 375 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 KLK11Q9UBX7 282 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 ZMIZ1Q9ULJ6 1067 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 CLDN16Q9Y5I7 305 aa11.15□□□□□ -0.62
SHMT2-207ENST00000553837 LAMA1P25391 3075 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 SPEGQ15772 3267 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 A0A1W2PPK0 400 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 SLC22A31A6NKX4 558 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 EFCAB7A8K855 629 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 B4DGG1 531 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 MRPL3P09001 348 aaKnown RBP11.14□□□□□ -0.63
SHMT2-207ENST00000553837 MELKQ14680 651 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 NDUFAF6Q330K2 333 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 KIAA0895LQ68EN5 471 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 SYT9Q86SS6 491 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 OR52L1Q8NGH7 329 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 C15orf40Q8WUR7 153 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 S100A16Q96FQ6 103 aaKnown RBP11.14□□□□□ -0.63
SHMT2-207ENST00000553837 TNFRSF13CQ96RJ3 184 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 GPR174Q9BXC1 333 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 SEMA6CQ9H3T2 930 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 BARX1Q9HBU1 254 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-207ENST00000553837 CMC2Q9NRP2 79 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 DNAJB12Q9NXW2 375 aaKnown RBP11.14□□□□□ -0.63
SHMT2-207ENST00000553837 AK6Q9Y3D8 172 aaKnown RBP11.14□□□□□ -0.63
SHMT2-207ENST00000553837 PRKNO60260 465 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-207ENST00000553837 OR10H2O60403 315 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 PPP1R3DO95685 299 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 GYPBP06028 91 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 BMP7P18075 431 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 PTAFRP25105 342 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 PYCR1P32322 319 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 FNTBP49356 437 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 P2RY4P51582 365 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 CAPZA1P52907 286 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 OR12D2P58182 307 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 BTG2P78543 158 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 NNATQ16517 81 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 EIF2S3LQ2VIR3 472 aaKnown RBP11.14□□□□□ -0.63
SHMT2-207ENST00000553837 RPTNQ6XPR3 784 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 SLC36A1Q7Z2H8 476 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 OOSP2Q86WS3 158 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 SPAG16Q8N0X2 631 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 RFLNBQ8N5W9 214 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 TMEM185AQ8NFB2 350 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 OR2AK2Q8NG84 335 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 OR52B4Q8NGK2 314 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 RLN3Q8WXF3 142 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 PEX11GQ96HA9 241 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 SPACA7Q96KW9 195 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 TEAD3Q99594 435 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 ZNF426Q9BUY5 554 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 LRRC61Q9BV99 259 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 OR51V1Q9H2C8 321 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 MED31Q9Y3C7 131 aa11.14□□□□□ -0.63
SHMT2-207ENST00000553837 A0A0C4DFX4 3053 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms