RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 CD300LFQ8TDQ1 290 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 KIFAP3Q92845 792 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 PEX13Q92968 403 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 MSANTD3Q96H12 275 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 C4orf36Q96KX1 117 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 AMDHD1Q96NU7 426 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 C9orf16Q9BUW7 83 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 EDEM2Q9BV94 578 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 MRPL37Q9BZE1 423 aaKnown RBP1.77□□□□□ -2.13
VRK1-202ENST00000553683 LINC00597Q9H2U6 94 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 REEP4Q9H6H4 257 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 MEAF6Q9HAF1 191 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 SLC17A5Q9NRA2 495 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 NRBP2Q9NSY0 501 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 SLC39A1Q9NY26 324 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 IL37Q9NZH6 218 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 OR12D3Q9UGF7 316 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 CD300AQ9UGN4 299 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 STAP1Q9ULZ2 295 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 DDX19BQ9UMR2 479 aa1.77□□□□□ -2.13
VRK1-202ENST00000553683 INSRP06213 1382 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 TTC21AQ8NDW8 1320 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 HSBP1L1C9JCN9 74 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 C11orf94C9JXX5 98 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 H3BQV1 296 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 GOLGA8MH3BSY2 632 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 RRP8O43159 456 aaKnown RBP1.76□□□□□ -2.13
VRK1-202ENST00000553683 TOM1O60784 492 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 IDH1O75874 414 aaKnown RBP1.76□□□□□ -2.13
VRK1-202ENST00000553683 RBBP9O75884 186 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 FLOT1O75955 427 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 AK1P00568 194 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 HLA-DRAP01903 254 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 KRT8P05787 483 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 CD5P06127 495 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 IVLP07476 585 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 SMIM10L1P0DMW3 83 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 GLRA2P23416 452 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 IL32P24001 234 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 MMP11P24347 488 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 IL12AP29459 219 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 MDH1P40925 334 aaKnown RBP1.76□□□□□ -2.13
VRK1-202ENST00000553683 HTR2BP41595 481 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 RANBP1P43487 201 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 GYG1P46976 350 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 PPT1P50897 306 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 MAP3K7CLP57077 242 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 HMGCS1Q01581 520 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 NCBP1Q09161 790 aaKnown RBP1.76□□□□□ -2.13
VRK1-202ENST00000553683 ELP6Q0PNE2 266 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 IL24Q13007 206 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 GPM6BQ13491 265 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 VGLL4Q14135 290 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 GANABQ14697 944 aaKnown RBP1.76□□□□□ -2.13
VRK1-202ENST00000553683 TPD52L1Q16890 204 aaPredicted RBP1.76□□□□□ -2.13
VRK1-202ENST00000553683 USH1GQ495M9 461 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 GGTA1PQ4G0N0 100 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 BCL7AQ4VC05 210 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 NCR3LG1Q68D85 454 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 DEGS2Q6QHC5 323 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 BLOC1S2Q6QNY1 142 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 SASS6Q6UVJ0 657 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 LYPD2Q6UXB3 125 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 HSDL2Q6YN16 418 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 ZNF573Q86YE8 665 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 PSTKQ8IV42 348 aaKnown RBP1.76□□□□□ -2.13
VRK1-202ENST00000553683 ZDHHC21Q8IVQ6 265 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 ZNF695Q8IW36 515 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 CYB561D1Q8N8Q1 229 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 DNAAF3Q8N9W5 541 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 CCDC54Q8NEL0 328 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 ZNF680Q8NEM1 530 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 ZNF461Q8TAF7 563 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 FANK1Q8TC84 345 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 DDI1Q8WTU0 396 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 MAIP1Q8WWC4 291 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 FRZBQ92765 325 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 FGF14Q92915 247 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 DTNBP1Q96EV8 351 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 TMA16Q96EY4 203 aaKnown RBP1.76□□□□□ -2.13
VRK1-202ENST00000553683 SMIM10Q96HG1 83 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 ZBED3Q96IU2 234 aaPredicted RBP1.76□□□□□ -2.13
VRK1-202ENST00000553683 CIB1Q99828 191 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 CCT7Q99832 543 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 CCDC77Q9BR77 488 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 SIKE1Q9BRV8 207 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 ERP44Q9BS26 406 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 LRRC19Q9H756 370 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 C12orf10Q9HB07 376 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 SPACA1Q9HBV2 294 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 MRM3Q9HC36 420 aaKnown RBP1.76□□□□□ -2.13
VRK1-202ENST00000553683 SLC35D1Q9NTN3 355 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 TAS2R7Q9NYW3 318 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 IL36GQ9NZH8 169 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 EMC3Q9P0I2 261 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 COX16Q9P0S2 106 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 DEC1Q9P2X7 70 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 SLC7A8Q9UHI5 535 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 AURKCQ9UQB9 309 aa1.76□□□□□ -2.13
VRK1-202ENST00000553683 CBY1Q9Y3M2 126 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms