RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 MISPQ8IVT2 679 aa4.17□□□□□ -1.74
ATXN3-222ENST00000553570 GOT1L1Q8NHS2 421 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-222ENST00000553570 GPR119Q8TDV5 335 aa4.17□□□□□ -1.74
ATXN3-222ENST00000553570 SLC38A5Q8WUX1 472 aa4.17□□□□□ -1.74
ATXN3-222ENST00000553570 ITLN2Q8WWU7 325 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-222ENST00000553570 ASB5Q8WWX0 329 aa4.17□□□□□ -1.74
ATXN3-222ENST00000553570 TMEM234Q8WY98 164 aa4.17□□□□□ -1.74
ATXN3-222ENST00000553570 ROBO4Q8WZ75 1007 aa4.17□□□□□ -1.74
ATXN3-222ENST00000553570 GTF2H4Q92759 462 aa4.17□□□□□ -1.74
ATXN3-222ENST00000553570 OSTF1Q92882 214 aa4.17□□□□□ -1.74
ATXN3-222ENST00000553570 MAL2Q969L2 176 aa4.17□□□□□ -1.74
ATXN3-222ENST00000553570 RNF183Q96D59 192 aa4.17□□□□□ -1.74
ATXN3-222ENST00000553570 RSRC1Q96IZ7 334 aaKnown RBP4.17□□□□□ -1.74
ATXN3-222ENST00000553570 RNF145Q96MT1 663 aa4.17□□□□□ -1.74
ATXN3-222ENST00000553570 TRNT1Q96Q11 434 aaKnown RBP4.17□□□□□ -1.74
ATXN3-222ENST00000553570 TUBA1CQ9BQE3 449 aa4.17□□□□□ -1.74
ATXN3-222ENST00000553570 OR2B2Q9GZK3 357 aa4.17□□□□□ -1.74
ATXN3-222ENST00000553570 LAT2Q9GZY6 243 aa4.17□□□□□ -1.74
ATXN3-222ENST00000553570 ARMC7Q9H6L4 198 aa4.17□□□□□ -1.74
ATXN3-222ENST00000553570 SERINC1Q9NRX5 453 aa4.17□□□□□ -1.74
ATXN3-222ENST00000553570 GID8Q9NWU2 228 aa4.17□□□□□ -1.74
ATXN3-222ENST00000553570 CALML5Q9NZT1 146 aa4.17□□□□□ -1.74
ATXN3-222ENST00000553570 ARMCX1Q9P291 453 aa4.17□□□□□ -1.74
ATXN3-222ENST00000553570 P2RX2Q9UBL9 471 aa4.17□□□□□ -1.74
ATXN3-222ENST00000553570 RPS6KB2Q9UBS0 482 aa4.17□□□□□ -1.74
ATXN3-222ENST00000553570 FAM96BQ9Y3D0 163 aa4.17□□□□□ -1.74
ATXN3-222ENST00000553570 MRPS18CQ9Y3D5 142 aaKnown RBP4.17□□□□□ -1.74
ATXN3-222ENST00000553570 LYVE1Q9Y5Y7 322 aa4.17□□□□□ -1.74
ATXN3-222ENST00000553570 PRR14LQ5THK1 2151 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 A0A087WZY1 265 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 IGHV3-15A0A0B4J1V0 119 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 A0A1W2PQD3 144 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 SLC22A20A6NK97 555 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 GJE1A6NN92 205 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 EEF1E1-BLOC1S5C9J1V9 151 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 USP17L23D6RBM5 183 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 AP3D1O14617 1153 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 MRASO14807 208 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 EEF1E1O43324 174 aaKnown RBP4.16□□□□□ -1.74
ATXN3-222ENST00000553570 CXCL13O43927 109 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 TFPTP0C1Z6 253 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 ZCCHC18P0CG32 403 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 COX4I1P13073 169 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 UQCRBP14927 111 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 CPN1P15169 458 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 IL11P20809 199 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 CXCR1P25024 350 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 CHRNB4P30926 498 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 DCTDP32321 178 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 PTGER4P35408 488 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 EIF1P41567 113 aaKnown RBP4.16□□□□□ -1.74
ATXN3-222ENST00000553570 LHX2P50458 406 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 CRISP3P54108 245 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 OR2B6P58173 313 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 MTPNP58546 118 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 B3GALT5-AS1P59052 145 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 HOXC5Q00444 222 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 CDK6Q00534 326 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 IL1RL1Q01638 556 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 SCARB2Q14108 478 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 FGFBP1Q14512 234 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 GANABQ14697 944 aaKnown RBP4.16□□□□□ -1.74
ATXN3-222ENST00000553570 PON3Q15166 354 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 ZNF141Q15928 474 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 EXOC3L2Q2M3D2 409 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 GLYR1Q49A26 553 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-222ENST00000553570 GCNT6Q5T4J0 391 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 MRPL2Q5T653 305 aaKnown RBP4.16□□□□□ -1.74
ATXN3-222ENST00000553570 HEPHL1Q6MZM0 1159 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 CGB2Q6NT52 195 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 REEP3Q6NUK4 255 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 MEX3BQ6ZN04 569 aaKnown RBP4.16□□□□□ -1.74
ATXN3-222ENST00000553570 FRRS1Q6ZNA5 592 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 MSANTD1Q6ZTZ1 278 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 LUZP2Q86TE4 346 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 NOXA1Q86UR1 476 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 LACC1Q8IV20 430 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 CHERPQ8IWX8 916 aaKnown RBP4.16□□□□□ -1.74
ATXN3-222ENST00000553570 GCNT2Q8N0V5 402 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 CLIP4Q8N3C7 705 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 MARVELD2Q8N4S9 558 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 FADS6Q8N9I5 356 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 CHDHQ8NE62 594 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-222ENST00000553570 GJC3Q8NFK1 279 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 OR5W2Q8NH69 310 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 OR10A6Q8NH74 314 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 LILRB4Q8NHJ6 448 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 MIPOL1Q8TD10 442 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 TMEM19Q96HH6 336 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 OR5B2Q96R09 309 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 ZNF607Q96SK3 696 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 CGREF1Q99674 301 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 KLHDC3Q9BQ90 382 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 SLC39A3Q9BRY0 314 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 NMUR2Q9GZQ4 415 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 UBQLN3Q9H347 655 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 CALHM2Q9HA72 323 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 EFCAB1Q9HAE3 211 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 TIGARQ9NQ88 270 aa4.16□□□□□ -1.74
ATXN3-222ENST00000553570 SAR1AQ9NR31 198 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms