RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 C10orf53Q8N6V4 93 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 GLB1L3Q8NCI6 653 aaPredicted RBP7.7□□□□□ -1.18
SYNE2-209ENST00000553308 DEFB108BQ8NET1 73 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 OR4K5Q8NGD3 323 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 ZNF519Q8TB69 540 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 C11orf40Q8WZ69 217 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 CCL17Q92583 94 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 RAB1CQ92928 201 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 TMEM54Q969K7 222 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 SLC47A1Q96FL8 570 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 ZNF48Q96MX3 618 aaPredicted RBP7.7□□□□□ -1.18
SYNE2-209ENST00000553308 EPYCQ99645 322 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 RNF121Q9H920 327 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 TCF7L2Q9NQB0 619 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 MMP26Q9NRE1 261 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 THUMPD1Q9NXG2 353 aaKnown RBP7.7□□□□□ -1.18
SYNE2-209ENST00000553308 GLTPQ9NZD2 209 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 LEF1Q9UJU2 399 aaPredicted RBP7.7□□□□□ -1.18
SYNE2-209ENST00000553308 PKD1L1Q8TDX9 2849 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 A0A0B4J2E0 115 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 A0A1B0GX12 115 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 ZSCAN5BA6NJL1 495 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 C5orf58C9J3I9 102 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 SPRY3O43610 288 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 SLC22A3O75751 556 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 UBOX5O94941 541 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 MFN2O95140 757 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 IGHV1-46P01743 117 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 ADORA3P0DMS8 318 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 BMP2P12643 396 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 ETS2P15036 469 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 DRD4P21917 467 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 ZNF81P51508 661 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 UCP2P55851 309 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 NCALDP61601 193 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 IL13RA1P78552 427 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 BST1Q10588 318 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 BAMBIQ13145 260 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 STX3Q13277 289 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 MELKQ14680 651 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 OR1Q1Q15612 314 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 TBC1D28Q2M2D7 210 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 PDCD4Q53EL6 469 aaKnown RBP7.69□□□□□ -1.18
SYNE2-209ENST00000553308 SPRNQ5BIV9 151 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 SPATA46Q5T0L3 261 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 FAM91A1Q658Y4 838 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 TMEM53Q6P2H8 277 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 LRFN4Q6PJG9 635 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 DHRS4L2Q6PKH6 230 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 SLC35D2Q76EJ3 337 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 KIRREL3Q8IZU9 778 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 C10orf111Q8N326 155 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 OR9I1Q8NGQ6 314 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 OR1J1Q8NGS3 322 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 OR5J2Q8NH18 312 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 OR6X1Q8NH79 312 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 NFKBIDQ8NI38 313 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 ST7LQ8TDW4 575 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 POP5Q969H6 163 aaKnown RBP7.69□□□□□ -1.18
SYNE2-209ENST00000553308 ELMOD3Q96FG2 381 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 ITCHQ96J02 903 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 WFDC6Q9BQY6 131 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 BCL2L14Q9BZR8 327 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 ROPN1BQ9BZX4 212 aaPredicted RBP7.69□□□□□ -1.18
SYNE2-209ENST00000553308 RMND5AQ9H871 391 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 ZMAT3Q9HA38 289 aaKnown RBP7.69□□□□□ -1.18
SYNE2-209ENST00000553308 ROPN1Q9HAT0 212 aaPredicted RBP7.69□□□□□ -1.18
SYNE2-209ENST00000553308 DCAF16Q9NXF7 216 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 SELENONQ9NZV5 590 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 TESQ9UGI8 421 aaKnown RBP7.69□□□□□ -1.18
SYNE2-209ENST00000553308 PURGQ9UJV8 347 aaKnown RBP7.69□□□□□ -1.18
SYNE2-209ENST00000553308 NUP50Q9UKX7 468 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 TANC2Q9HCD6 1990 aa7.69□□□□□ -1.18
SYNE2-209ENST00000553308 TGP01266 2768 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 CLIC1O00299 241 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 TM9SF1O15321 606 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 DHHO43323 396 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 TPST2O60704 377 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 FOXH1O75593 365 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 FARS2O95363 451 aaKnown RBP7.68□□□□□ -1.18
SYNE2-209ENST00000553308 IGHV3-13P01766 116 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 MT-ND5P03915 603 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 RNASE1P07998 156 aaKnown RBP7.68□□□□□ -1.18
SYNE2-209ENST00000553308 PGA4P0DJD7 388 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 PGA3P0DJD8 388 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 IDO1P14902 403 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 HOXB9P17482 250 aaPredicted RBP7.68□□□□□ -1.18
SYNE2-209ENST00000553308 MDKP21741 143 aaPredicted RBP7.68□□□□□ -1.18
SYNE2-209ENST00000553308 MPV17P39210 176 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 ATP4BP51164 291 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 MMP15P51511 669 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 CDH12P55289 794 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 RGS8P57771 180 aaPredicted RBP7.68□□□□□ -1.18
SYNE2-209ENST00000553308 SEC61A1P61619 476 aaKnown RBP7.68□□□□□ -1.18
SYNE2-209ENST00000553308 ZNF154Q13106 437 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 FADDQ13158 208 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 MPP2Q14168 576 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 SLC36A2Q495M3 483 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 FAM209AQ5JX71 171 aa7.68□□□□□ -1.18
SYNE2-209ENST00000553308 NXNQ6DKJ4 435 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms