RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 ACTR1AP61163 376 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 CTAG1AP78358 180 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 PLAURQ03405 335 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 CSRP2Q16527 193 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 POMZP3Q6PJE2 187 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 SLC35F3Q8IY50 421 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 SLC22A18ASQ8N1D0 253 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 ZNF75AQ96N20 296 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 EXOSC3Q9NQT5 275 aaKnown RBP11.24□□□□□ -0.61
HDAC7-230ENST00000552960 PRDM6Q9NQX0 595 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 CYB5R1Q9UHQ9 305 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 NCOR1O75376 2440 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 H7C2Y5 167 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 CTSVO60911 334 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 KCNJ13O60928 360 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 IL5P05113 134 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 FAM53BQ14153 422 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 Q499Y3 187 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 OLFML2AQ68BL7 652 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 KRT77Q7Z794 578 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 JAZF1Q86VZ6 243 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 CLRN3Q8NCR9 226 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 OR13H1Q8NG92 308 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 OR52R1Q8NGF1 315 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 OR6N2Q8NGY6 317 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 ADAT1Q9BUB4 502 aaKnown RBP11.24□□□□□ -0.61
HDAC7-230ENST00000552960 FOXQ1Q9C009 403 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 FANCFQ9NPI8 374 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 OR2W5A6NFC9 320 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 ELOA3DA6NLF2 546 aaPredicted RBP11.24□□□□□ -0.61
HDAC7-230ENST00000552960 KCNAB3O43448 404 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 GLSO94925 669 aaPredicted RBP11.24□□□□□ -0.61
HDAC7-230ENST00000552960 GLAP06280 429 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 AQP2P41181 271 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 CBX5P45973 191 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 CAPZA2P47755 286 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 DHODHQ02127 395 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 ELOA3BQ3SY89 546 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 FBXO42Q6P3S6 717 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 ZNF227Q86WZ6 799 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 NPEPL1Q8NDH3 523 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 BPIFCQ8NFQ6 507 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 ELOA3Q8NG57 546 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 NSMAFQ92636 917 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 NKD1Q969G9 470 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 MICU1Q9BPX6 476 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 TMPRSS13Q9BYE2 586 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 ATG5Q9H1Y0 275 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 POFUT1Q9H488 388 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 PLEKHA6Q9Y2H5 1048 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 KLHDC2Q9Y2U9 406 aa11.24□□□□□ -0.61
HDAC7-230ENST00000552960 TMEM272A0A1B0GTI8 110 aa11.23□□□□□ -0.61
HDAC7-230ENST00000552960 SULT1B1O43704 296 aa11.23□□□□□ -0.61
HDAC7-230ENST00000552960 PRICKLE3O43900 615 aaPredicted RBP11.23□□□□□ -0.61
HDAC7-230ENST00000552960 CCKBRP32239 447 aa11.23□□□□□ -0.61
HDAC7-230ENST00000552960 B2MP61769 119 aa11.23□□□□□ -0.61
HDAC7-230ENST00000552960 CEBPEQ15744 281 aa11.23□□□□□ -0.61
HDAC7-230ENST00000552960 B3GNTL1Q67FW5 361 aaPredicted RBP11.23□□□□□ -0.61
HDAC7-230ENST00000552960 UNQ9370/PRO34162Q6UXP9 181 aa11.23□□□□□ -0.61
HDAC7-230ENST00000552960 HSD17B13Q7Z5P4 300 aaPredicted RBP11.23□□□□□ -0.61
HDAC7-230ENST00000552960 SAMD14Q8IZD0 417 aaPredicted RBP11.23□□□□□ -0.61
HDAC7-230ENST00000552960 C2CD4CQ8TF44 421 aa11.23□□□□□ -0.61
HDAC7-230ENST00000552960 ATOH1Q92858 354 aaPredicted RBP11.23□□□□□ -0.61
HDAC7-230ENST00000552960 FRRS1LQ9P0K9 344 aa11.23□□□□□ -0.61
HDAC7-230ENST00000552960 FREM2Q5SZK8 3169 aa11.23□□□□□ -0.61
HDAC7-230ENST00000552960 COL4A2P08572 1712 aa11.23□□□□□ -0.61
HDAC7-230ENST00000552960 HMSDA8MTL9 139 aa11.23□□□□□ -0.61
HDAC7-230ENST00000552960 DISC1C4P0D8 188 aa11.23□□□□□ -0.61
HDAC7-230ENST00000552960 DNASE2O00115 360 aaPredicted RBP11.23□□□□□ -0.61
HDAC7-230ENST00000552960 ATG12O94817 140 aa11.23□□□□□ -0.61
HDAC7-230ENST00000552960 HLA-DQA2P01906 255 aa11.23□□□□□ -0.61
HDAC7-230ENST00000552960 IGHV4-34P06331 123 aa11.23□□□□□ -0.61
HDAC7-230ENST00000552960 MAOBP27338 520 aa11.23□□□□□ -0.61
HDAC7-230ENST00000552960 MNDAP41218 407 aa11.23□□□□□ -0.61
HDAC7-230ENST00000552960 ILF3Q12906 894 aaKnown RBP eCLIP11.23□□□□□ -0.61
HDAC7-230ENST00000552960 NKPD1Q17RQ9 610 aa11.23□□□□□ -0.61
HDAC7-230ENST00000552960 Q6ZSR6 202 aa11.23□□□□□ -0.61
HDAC7-230ENST00000552960 DPY19L4Q7Z388 723 aa11.23□□□□□ -0.61
HDAC7-230ENST00000552960 TSNAXQ99598 290 aaKnown RBP11.23□□□□□ -0.61
HDAC7-230ENST00000552960 UQCC2Q9BRT2 126 aa11.23□□□□□ -0.61
HDAC7-230ENST00000552960 PELOQ9BRX2 385 aaKnown RBP11.23□□□□□ -0.61
HDAC7-230ENST00000552960 NKX6-2Q9C056 277 aaPredicted RBP11.23□□□□□ -0.61
HDAC7-230ENST00000552960 ZMAT5Q9UDW3 170 aaKnown RBP11.23□□□□□ -0.61
HDAC7-230ENST00000552960 MMP17Q9ULZ9 603 aa11.23□□□□□ -0.61
HDAC7-230ENST00000552960 NOP16Q9Y3C1 178 aaKnown RBP11.23□□□□□ -0.61
HDAC7-230ENST00000552960 ABCA7Q8IZY2 2146 aa11.23□□□□□ -0.61
HDAC7-230ENST00000552960 ARPC4-TTLL3A0A0A6YYG9 625 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 A0A1B0GW55 424 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 KANTRA0A1W2PQU2 76 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 PRR19A6NJB7 356 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 BRINP1O60477 761 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 HPP00738 406 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 DUX4L2P0CJ85 424 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 DUX4L3P0CJ86 424 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 DUX4L4P0CJ87 422 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 DUX4L5P0CJ88 424 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 DUX4L6P0CJ89 424 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 DUX4L7P0CJ90 424 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 PRSS3P35030 304 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 CDKN2AP42771 156 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms