RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 MSX2P35548 267 aaPredicted RBP10.24□□□□□ -0.77
CKAP4-202ENST00000552828 TUBA1BP68363 451 aa10.24□□□□□ -0.77
CKAP4-202ENST00000552828 TUBA4AP68366 448 aa10.24□□□□□ -0.77
CKAP4-202ENST00000552828 POU3F1Q03052 451 aaPredicted RBP10.24□□□□□ -0.77
CKAP4-202ENST00000552828 PIN1Q13526 163 aaPredicted RBP10.24□□□□□ -0.77
CKAP4-202ENST00000552828 MFSD13AQ14CX5 517 aa10.24□□□□□ -0.77
CKAP4-202ENST00000552828 FAM69AQ5T7M9 428 aa10.24□□□□□ -0.77
CKAP4-202ENST00000552828 NIPAL3Q6P499 406 aa10.24□□□□□ -0.77
CKAP4-202ENST00000552828 TTC33Q6PID6 262 aaPredicted RBP10.24□□□□□ -0.77
CKAP4-202ENST00000552828 TUBA1AQ71U36 451 aa10.24□□□□□ -0.77
CKAP4-202ENST00000552828 TSPYL5Q86VY4 417 aaPredicted RBP10.24□□□□□ -0.77
CKAP4-202ENST00000552828 LINC01356Q8N9X3 169 aa10.24□□□□□ -0.77
CKAP4-202ENST00000552828 OR6S1Q8NH40 331 aa10.24□□□□□ -0.77
CKAP4-202ENST00000552828 TAAR8Q969N4 342 aa10.24□□□□□ -0.77
CKAP4-202ENST00000552828 NSMCE2Q96MF7 247 aa10.24□□□□□ -0.77
CKAP4-202ENST00000552828 PTDSS2Q9BVG9 487 aa10.24□□□□□ -0.77
CKAP4-202ENST00000552828 TAS2R1Q9NYW7 299 aa10.24□□□□□ -0.77
CKAP4-202ENST00000552828 TMEFF2Q9UIK5 374 aaPredicted RBP10.24□□□□□ -0.77
CKAP4-202ENST00000552828 RIMS3Q9UJD0 308 aa10.24□□□□□ -0.77
CKAP4-202ENST00000552828 SLC7A7Q9UM01 511 aa10.24□□□□□ -0.77
CKAP4-202ENST00000552828 PRPF19Q9UMS4 504 aaKnown RBP10.24□□□□□ -0.77
CKAP4-202ENST00000552828 RCE1Q9Y256 329 aa10.24□□□□□ -0.77
CKAP4-202ENST00000552828 SNX13Q9Y5W8 968 aa10.24□□□□□ -0.77
CKAP4-202ENST00000552828 IGHV2OR16-5A0A0B4J2B6 119 aa10.23□□□□□ -0.77
CKAP4-202ENST00000552828 LOC102725191A0A1B0GVB3 256 aa10.23□□□□□ -0.77
CKAP4-202ENST00000552828 hCG_2039718K7EN88 272 aa10.23□□□□□ -0.77
CKAP4-202ENST00000552828 ARPC2O15144 300 aa10.23□□□□□ -0.77
CKAP4-202ENST00000552828 LYPD3O95274 346 aa10.23□□□□□ -0.77
CKAP4-202ENST00000552828 ERCC1P07992 297 aaPredicted RBP10.23□□□□□ -0.77
CKAP4-202ENST00000552828 CELA3BP08861 270 aa10.23□□□□□ -0.77
CKAP4-202ENST00000552828 ARR3P36575 388 aa10.23□□□□□ -0.77
CKAP4-202ENST00000552828 CDH15P55291 814 aa10.23□□□□□ -0.77
CKAP4-202ENST00000552828 ARF1P84077 181 aaKnown RBP10.23□□□□□ -0.77
CKAP4-202ENST00000552828 ROR2Q01974 943 aaKnown RBP10.23□□□□□ -0.77
CKAP4-202ENST00000552828 ST3GAL3Q11203 375 aa10.23□□□□□ -0.77
CKAP4-202ENST00000552828 VHLLQ6RSH7 139 aa10.23□□□□□ -0.77
CKAP4-202ENST00000552828 UGT2A3Q6UWM9 527 aa10.23□□□□□ -0.77
CKAP4-202ENST00000552828 MYPOPQ86VE0 399 aaPredicted RBP10.23□□□□□ -0.77
CKAP4-202ENST00000552828 MEX3DQ86XN8 651 aaKnown RBP10.23□□□□□ -0.77
CKAP4-202ENST00000552828 CCDC36Q8IYA8 594 aa10.23□□□□□ -0.77
CKAP4-202ENST00000552828 ZCCHC24Q8N2G6 241 aaKnown RBP10.23□□□□□ -0.77
CKAP4-202ENST00000552828 SVOPLQ8N434 492 aa10.23□□□□□ -0.77
CKAP4-202ENST00000552828 C10orf53Q8N6V4 93 aa10.23□□□□□ -0.77
CKAP4-202ENST00000552828 IL17RDQ8NFM7 739 aa10.23□□□□□ -0.77
CKAP4-202ENST00000552828 PRRC1Q96M27 445 aa10.23□□□□□ -0.77
CKAP4-202ENST00000552828 SLC19A3Q9BZV2 496 aa10.23□□□□□ -0.77
CKAP4-202ENST00000552828 B3GAT1Q9P2W7 334 aa10.23□□□□□ -0.77
CKAP4-202ENST00000552828 CORINQ9Y5Q5 1042 aa10.23□□□□□ -0.77
CKAP4-202ENST00000552828 MEGF8Q7Z7M0 2845 aa10.23□□□□□ -0.77
CKAP4-202ENST00000552828 ZNF503-AS2A6NEH8 195 aa10.22□□□□□ -0.77
CKAP4-202ENST00000552828 GYG2O15488 501 aa10.22□□□□□ -0.77
CKAP4-202ENST00000552828 MT-ATP6P00846 226 aa10.22□□□□□ -0.77
CKAP4-202ENST00000552828 APEX1P27695 318 aaKnown RBP10.22□□□□□ -0.77
CKAP4-202ENST00000552828 GRPRP30550 384 aa10.22□□□□□ -0.77
CKAP4-202ENST00000552828 RBM34P42696 430 aaKnown RBP10.22□□□□□ -0.77
CKAP4-202ENST00000552828 YAP1P46937 504 aaKnown RBP10.22□□□□□ -0.77
CKAP4-202ENST00000552828 EVX1P49640 407 aa10.22□□□□□ -0.77
CKAP4-202ENST00000552828 CLDN17P56750 224 aa10.22□□□□□ -0.77
CKAP4-202ENST00000552828 RIPK1Q13546 671 aa10.22□□□□□ -0.77
CKAP4-202ENST00000552828 DNAL1Q4LDG9 190 aa10.22□□□□□ -0.77
CKAP4-202ENST00000552828 WDR88Q6ZMY6 472 aa10.22□□□□□ -0.77
CKAP4-202ENST00000552828 H1FNTQ75WM6 255 aaPredicted RBP10.22□□□□□ -0.77
CKAP4-202ENST00000552828 CYP4Z1Q86W10 505 aa10.22□□□□□ -0.77
CKAP4-202ENST00000552828 KDM8Q8N371 416 aa10.22□□□□□ -0.77
CKAP4-202ENST00000552828 UBASH3BQ8TF42 649 aa10.22□□□□□ -0.77
CKAP4-202ENST00000552828 PYURFQ96I23 114 aa10.22□□□□□ -0.77
CKAP4-202ENST00000552828 OXGR1Q96P68 337 aa10.22□□□□□ -0.77
CKAP4-202ENST00000552828 PRSS27Q9BQR3 290 aa10.22□□□□□ -0.77
CKAP4-202ENST00000552828 THTPAQ9BU02 230 aa10.22□□□□□ -0.77
CKAP4-202ENST00000552828 ZNF426Q9BUY5 554 aa10.22□□□□□ -0.77
CKAP4-202ENST00000552828 FNDC11Q9BVV2 318 aa10.22□□□□□ -0.77
CKAP4-202ENST00000552828 ASPNQ9BXN1 380 aa10.22□□□□□ -0.77
CKAP4-202ENST00000552828 MUC13Q9H3R2 512 aa10.22□□□□□ -0.77
CKAP4-202ENST00000552828 GPR35Q9HC97 309 aa10.22□□□□□ -0.77
CKAP4-202ENST00000552828 B3GNT2Q9NY97 397 aa10.22□□□□□ -0.77
CKAP4-202ENST00000552828 ACTR3BQ9P1U1 418 aa10.22□□□□□ -0.77
CKAP4-202ENST00000552828 A4GNTQ9UNA3 340 aa10.22□□□□□ -0.77
CKAP4-202ENST00000552828 FAM32AQ9Y421 112 aaKnown RBP10.22□□□□□ -0.77
CKAP4-202ENST00000552828 M0R082 166 aa10.21□□□□□ -0.77
CKAP4-202ENST00000552828 KPNA4O00629 521 aaPredicted RBP10.21□□□□□ -0.77
CKAP4-202ENST00000552828 MGRN1O60291 552 aa10.21□□□□□ -0.77
CKAP4-202ENST00000552828 SLC43A1O75387 559 aa10.21□□□□□ -0.77
CKAP4-202ENST00000552828 ATP5HO75947 161 aa10.21□□□□□ -0.77
CKAP4-202ENST00000552828 BGLAPP02818 100 aa10.21□□□□□ -0.77
CKAP4-202ENST00000552828 NQO1P15559 274 aaKnown RBP10.21□□□□□ -0.77
CKAP4-202ENST00000552828 ZNF43P17038 809 aa10.21□□□□□ -0.77
CKAP4-202ENST00000552828 ITGA2P17301 1181 aa10.21□□□□□ -0.77
CKAP4-202ENST00000552828 CBLP22681 906 aa10.21□□□□□ -0.77
CKAP4-202ENST00000552828 NR4A1P22736 598 aa10.21□□□□□ -0.77
CKAP4-202ENST00000552828 DVL1P1P54792 670 aaPredicted RBP10.21□□□□□ -0.77
CKAP4-202ENST00000552828 BNIP1Q12981 228 aa10.21□□□□□ -0.77
CKAP4-202ENST00000552828 PMS2P3Q13401 168 aa10.21□□□□□ -0.77
CKAP4-202ENST00000552828 TRIM25Q14258 630 aaKnown RBP10.21□□□□□ -0.77
CKAP4-202ENST00000552828 TRAM2Q15035 370 aa10.21□□□□□ -0.77
CKAP4-202ENST00000552828 MDP1Q86V88 176 aa10.21□□□□□ -0.77
CKAP4-202ENST00000552828 NKAIN4Q8IVV8 208 aa10.21□□□□□ -0.77
CKAP4-202ENST00000552828 CDK20Q8IZL9 346 aa10.21□□□□□ -0.77
CKAP4-202ENST00000552828 OFCC1Q8IZS5 231 aa10.21□□□□□ -0.77
CKAP4-202ENST00000552828 TMEM123Q8N131 208 aa10.21□□□□□ -0.77
CKAP4-202ENST00000552828 SCAIQ8N9R8 606 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms