RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 RPL4P36578 427 aaKnown RBP3.58□□□□□ -1.84
USP44-208ENST00000552440 TGFBR2P37173 567 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 LEPP41159 167 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 MAGEA3P43357 314 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 STX4Q12846 297 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 TRAF3Q13114 568 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 GPNMBQ14956 572 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 SF3A2Q15428 464 aaKnown RBP3.58□□□□□ -1.84
USP44-208ENST00000552440 TAL2Q16559 108 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 NDUFA9Q16795 377 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 RFX4Q33E94 735 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 EIPR1Q53HC9 387 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 LCE1AQ5T7P2 110 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 SYPL2Q5VXT5 272 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 MORN5Q5VZ52 161 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 LPCAT4Q643R3 524 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 SLC16A12Q6ZSM3 486 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 CCDC121Q6ZUS5 278 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 USP43Q70EL4 1123 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 SMIM15Q7Z3B0 74 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 CMC1Q7Z7K0 106 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 LRRC52Q8N7C0 313 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 TCEANCQ8N8B7 351 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 ATP6V0D2Q8N8Y2 350 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 ATP6V1C2Q8NEY4 427 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 VN1R2Q8NFZ6 395 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 OR1S2Q8NGQ3 325 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 OR6K6Q8NGW6 343 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 OR5K2Q8NHB8 316 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 FBXO25Q8TCJ0 367 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 BLOC1S5Q8TDH9 187 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 TMEM174Q8WUU8 243 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 STMN2Q93045 179 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 YIPF6Q96EC8 236 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 SGTBQ96EQ0 304 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 EBNA1BP2Q99848 306 aaKnown RBP3.58□□□□□ -1.84
USP44-208ENST00000552440 FNDC4Q9H6D8 234 aaPredicted RBP3.58□□□□□ -1.84
USP44-208ENST00000552440 UBE2TQ9NPD8 197 aaPredicted RBP3.58□□□□□ -1.84
USP44-208ENST00000552440 ACP6Q9NPH0 428 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 ISYNA1Q9NPH2 558 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 ASCL3Q9NQ33 180 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 OPN4Q9UHM6 478 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 TFR2Q9UP52 801 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 KCNIP3Q9Y2W7 256 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 GMPPBQ9Y5P6 360 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 RAB3GAP2Q9H2M9 1393 aa3.58□□□□□ -1.84
USP44-208ENST00000552440 A0A087WZ39 114 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 A0A0A6YYD5 115 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 IGHV2-70DA0A0C4DH43 119 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 TRBV7-9A0A0J9YWB2 115 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 LOC101059948A0A1B0GTJ6 334 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 A0A1B0GVI7 797 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 FAM231BA6NCW3 169 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 VSTM2BA6NLU5 285 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 ZNF814B7Z6K7 855 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 ACOX3O15254 700 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 SLC31A1O15431 190 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 MAGEB4O15481 346 aaPredicted RBP3.57□□□□□ -1.84
USP44-208ENST00000552440 ZNHIT1O43257 154 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 TGOLN2O43493 480 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 CXCL13O43927 109 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 OAS1P00973 400 aaKnown RBP3.57□□□□□ -1.84
USP44-208ENST00000552440 IFNA2P01563 188 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 TCRBP04435 133 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 TACSTD2P09758 323 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 IDO1P14902 403 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 ME2P23368 584 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 GAS1P54826 345 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 TLE4Q04727 773 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 RIGQ13278 110 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 EIF2B1Q14232 305 aaKnown RBP3.57□□□□□ -1.84
USP44-208ENST00000552440 LAGE3Q14657 143 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 RAB35Q15286 201 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 RFTN2Q52LD8 501 aaPredicted RBP3.57□□□□□ -1.84
USP44-208ENST00000552440 FNBP1LQ5T0N5 605 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 DUPD1Q68J44 220 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 C11orf87Q6NUJ2 197 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 PARM1Q6UWI2 310 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 DRAM2Q6UX65 266 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 ZNF66Q6ZN08 573 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 Q6ZSR9 355 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 C16orf82Q7Z2V1 217 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 SLC51BQ86UW2 128 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 RNF113BQ8IZP6 322 aaKnown RBP3.57□□□□□ -1.84
USP44-208ENST00000552440 ABHD12Q8N2K0 398 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 MDS2Q8NDY4 140 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 OR51F2Q8NH61 342 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 ITFG1Q8TB96 612 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 DYNC2LI1Q8TCX1 351 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 TOMM40LQ969M1 308 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 NTNG2Q96CW9 530 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 RTP4Q96DX8 246 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 ABHD8Q96I13 439 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 PSD2Q9BQI7 771 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 ZNF670Q9BS34 389 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 SLC35A5Q9BS91 424 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 SLC22A4Q9H015 551 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 LHX5Q9H2C1 402 aa3.57□□□□□ -1.84
USP44-208ENST00000552440 RNF41Q9H4P4 317 aaPredicted RBP3.57□□□□□ -1.84
USP44-208ENST00000552440 TMBIM4Q9HC24 238 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms