RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 EPHX2P34913 555 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 RDXP35241 583 aaKnown RBP2.14□□□□□ -2.07
CCDC38-208ENST00000549876 HSD17B2P37059 387 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 CCR6P51684 374 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 KPNA2P52292 529 aaKnown RBP2.14□□□□□ -2.07
CCDC38-208ENST00000549876 ZNF136P52737 540 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 CARD18P57730 90 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 RAB10P61026 200 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 DNAJC3Q13217 504 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 OR5I1Q13606 314 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 ARL6IP1Q15041 203 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 LY6EQ16553 131 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 PAGE3Q5JUK9 113 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 AADACL4Q5VUY2 407 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 PLCXD3Q63HM9 321 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 OR52E8Q6IFG1 317 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 UNQ9370/PRO34162Q6UXP9 181 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 HSDL2Q6YN16 418 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 CERS6Q6ZMG9 384 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 VRK2Q86Y07 508 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 TMEM61Q8N0U2 210 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 ZNF740Q8NDX6 193 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 OR56B4Q8NH76 319 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 PLPPR1Q8TBJ4 325 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 GPX8Q8TED1 209 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 PAQR8Q8TEZ7 354 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 STMN2Q93045 179 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 C8orf44Q96CB5 159 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 GSDMAQ96QA5 445 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 FAIM2Q9BWQ8 316 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 SRXN1Q9BYN0 137 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 PLA2G2FQ9BZM2 168 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 STMN4Q9H169 189 aaPredicted RBP2.14□□□□□ -2.07
CCDC38-208ENST00000549876 BLZF1Q9H2G9 400 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 ELOVL6Q9H5J4 265 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 GPATCH2LQ9NWQ4 482 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 THUMPD1Q9NXG2 353 aaKnown RBP2.14□□□□□ -2.07
CCDC38-208ENST00000549876 HOXC10Q9NYD6 342 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 DCDC2Q9UHG0 476 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 KCNIP3Q9Y2W7 256 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 PLLPQ9Y342 182 aa2.14□□□□□ -2.07
CCDC38-208ENST00000549876 GJE1A6NN92 205 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 SERPINE3A8MV23 424 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 LOC110117498-PIK3R3F6TDL0 507 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 DCTN6O00399 190 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 CHST1O43916 411 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 TOM1O60784 492 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 C1orf105O95561 183 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 FGF1P05230 155 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 CRYGCP07315 174 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 TPM1P09493 284 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 NPR2P20594 1047 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 STOMP27105 288 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 FOXN2P32314 431 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 RFX3P48380 749 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 CSNK1DP48730 415 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 DAOAP59103 153 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 MRPS22P82650 360 aaKnown RBP2.13□□□□□ -2.07
CCDC38-208ENST00000549876 CCDC173Q0VFZ6 552 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 HSDL1Q3SXM5 330 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 HIKESHIQ53FT3 197 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 KLF17Q5JT82 389 aaPredicted RBP2.13□□□□□ -2.07
CCDC38-208ENST00000549876 OR2G6Q5TZ20 316 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 C9orf135Q5VTT2 229 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 TWF2Q6IBS0 349 aaKnown RBP2.13□□□□□ -2.07
CCDC38-208ENST00000549876 C22orf42Q6IC83 251 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 IGFL1Q6UW32 110 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 C19orf35Q6ZS72 473 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 NIPA1Q7RTP0 329 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 OR4K14Q8NGD5 310 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 OR4A4PQ8NGN8 299 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 PYROXD1Q8WU10 500 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 DEDD2Q8WXF8 326 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 KIFAP3Q92845 792 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 PAGE5Q96GU1 130 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 RGCCQ9H4X1 137 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 XKR8Q9H6D3 395 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 CHRAC1Q9NRG0 131 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 NEUROG3Q9Y4Z2 214 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 KIF27Q86VH2 1401 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 SH3TC1Q8TE82 1336 aa2.13□□□□□ -2.07
CCDC38-208ENST00000549876 NSG1A0A0A6YYJ2 146 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 TRBV9A0A0B4J1U6 114 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 IGHV3-64DA0A0J9YX35 117 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 A0A0J9YYE9 177 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 SMCO2A6NFE2 343 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 ERICH4A6NGS2 130 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 LRRIQ3A6PVS8 624 aaPredicted RBP2.12□□□□□ -2.07
CCDC38-208ENST00000549876 GABRR3A8MPY1 467 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 ZNF701M0R085 212 aaPredicted RBP2.12□□□□□ -2.07
CCDC38-208ENST00000549876 NDUFS8O00217 210 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 SIRPB1O00241 398 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 PES1O00541 588 aaKnown RBP2.12□□□□□ -2.07
CCDC38-208ENST00000549876 NDUFAB1O14561 156 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 HCRTR1O43613 425 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 SOX15O60248 233 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 STAMBPO95630 424 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 SNAI1O95863 264 aaPredicted RBP2.12□□□□□ -2.07
CCDC38-208ENST00000549876 TRBC1P01850 177 aa2.12□□□□□ -2.07
CCDC38-208ENST00000549876 C2P06681 752 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms