RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 CCDC167Q9P0B6 97 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 IL36RNQ9UBH0 155 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 ERVK-19Q9WJR5 959 aa3.31□□□□□ -1.88
APAF1-208ENST00000549007 RRP15Q9Y3B9 282 aaKnown RBP3.31□□□□□ -1.88
APAF1-208ENST00000549007 ATMQ13315 3056 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 TRAV24A0A0B4J272 114 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 HNRNPCL2B2RXH8 293 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 SLCO1B7G3V0H7 640 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 K7EM74 188 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 CFLARO15519 480 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 LANCL1O43813 399 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 CTNSO60931 367 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 ITGA3P26006 1051 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 HPCAL1P37235 193 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 GAS1P54826 345 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 CPTPQ5TA50 214 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 OLIG3Q7RTU3 272 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 PNPT1Q8TCS8 783 aaKnown RBP3.3□□□□□ -1.88
APAF1-208ENST00000549007 HAS2Q92819 552 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 NCLNQ969V3 563 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 AURKBQ96GD4 344 aaPredicted RBP3.3□□□□□ -1.88
APAF1-208ENST00000549007 CCT8L2Q96SF2 557 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 NUDT9Q9BW91 350 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 GLIPR2Q9H4G4 154 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 REEP4Q9H6H4 257 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 RNF121Q9H920 327 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 WDR54Q9H977 334 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 ZBTB20Q9HC78 741 aaPredicted RBP3.3□□□□□ -1.88
APAF1-208ENST00000549007 ADAP2Q9NPF8 381 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 SLC35D1Q9NTN3 355 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 NXT1Q9UKK6 140 aaKnown RBP3.3□□□□□ -1.88
APAF1-208ENST00000549007 ENTPD4Q9Y227 616 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 IGHV1-45A0A0A0MS14 117 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 NSG1A0A0A6YYJ2 146 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 TRBV11-1A0A0K0K1C0 115 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 LOC100653049A0A140TA62 436 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 KRTAP9-6A0A140TA67 174 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 KRTAP9-7A8MTY7 169 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 KRT34O76011 436 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 PRPS2P11908 318 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 GPX3P22352 226 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 CDKN2CP42773 168 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 TSFMP43897 325 aaKnown RBP3.3□□□□□ -1.88
APAF1-208ENST00000549007 ZFP36L2P47974 494 aaKnown RBP3.3□□□□□ -1.88
APAF1-208ENST00000549007 RFX3P48380 749 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 TRPC1P48995 793 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 ZNF33BQ06732 778 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 HEPACAMQ14CZ8 416 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 VPS26BQ4G0F5 336 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 TMEM205Q6UW68 189 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 ZER1Q7Z7L7 766 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 RAB43Q86YS6 212 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 FUNDC1Q8IVP5 155 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 RIMKLAQ8IXN7 391 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 PRR22Q8IZ63 422 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 FBXL14Q8N1E6 418 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 LRRC25Q8N386 305 aaPredicted RBP3.3□□□□□ -1.88
APAF1-208ENST00000549007 OR7G2Q8NG99 324 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 NTN5Q8WTR8 489 aaPredicted RBP3.3□□□□□ -1.88
APAF1-208ENST00000549007 THOC3Q96J01 351 aaKnown RBP3.3□□□□□ -1.88
APAF1-208ENST00000549007 ZNF681Q96N22 645 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 OR2B2Q9GZK3 357 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 ING2Q9H160 280 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 MS4A12Q9NXJ0 267 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 MAT2BQ9NZL9 334 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 BCAP29Q9UHQ4 241 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 ZNF223Q9UK11 482 aaPredicted RBP3.3□□□□□ -1.88
APAF1-208ENST00000549007 TMED5Q9Y3A6 229 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 ZNF780BQ9Y6R6 833 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 NBEAQ8NFP9 2946 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 NBASA2RRP1 2371 aa3.3□□□□□ -1.88
APAF1-208ENST00000549007 ANKRD61A6NGH8 418 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 WWP2O00308 870 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 ZNF354AO60765 605 aaPredicted RBP3.29□□□□□ -1.88
APAF1-208ENST00000549007 RAD51DO75771 328 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 IDO1P14902 403 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 CSNK2A2P19784 350 aaPredicted RBP3.29□□□□□ -1.88
APAF1-208ENST00000549007 NTSP30990 170 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 ASMTP46597 345 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 IER3P46695 156 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 CLDN8P56748 225 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 SRSF1Q07955 248 aaKnown RBP eCLIP3.29□□□□□ -1.88
APAF1-208ENST00000549007 TRAP1Q12931 704 aaKnown RBP3.29□□□□□ -1.88
APAF1-208ENST00000549007 MFAP5Q13361 173 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 RBM39Q14498 530 aaKnown RBP3.29□□□□□ -1.88
APAF1-208ENST00000549007 OR4A47Q6IF82 309 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 RNF165Q6ZSG1 346 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 HMGN2P46Q86SG4 172 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 CLIP4Q8N3C7 705 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 PLPP5Q8NEB5 264 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 OR52R1Q8NGF1 315 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 MRPL53Q96EL3 112 aaKnown RBP3.29□□□□□ -1.88
APAF1-208ENST00000549007 SENP5Q96HI0 755 aaPredicted RBP3.29□□□□□ -1.88
APAF1-208ENST00000549007 AMDHD1Q96NU7 426 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 LPAR4Q99677 370 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 SLC39A3Q9BRY0 314 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 CCDC28BQ9BUN5 200 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 NSRP1Q9H0G5 558 aaKnown RBP3.29□□□□□ -1.88
APAF1-208ENST00000549007 C5orf66Q9H5L9 145 aa3.29□□□□□ -1.88
APAF1-208ENST00000549007 CXorf21Q9HAI6 301 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms