RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 ANKRD19PQ9H560 264 aa12.9□□□□□ -0.34
CACNB3-209ENST00000548860 C2orf42Q9NWW7 574 aa12.9□□□□□ -0.34
CACNB3-209ENST00000548860 ROS1P08922 2347 aa12.9□□□□□ -0.34
CACNB3-209ENST00000548860 POLEQ07864 2286 aa12.9□□□□□ -0.34
CACNB3-209ENST00000548860 SFTPBP07988 381 aa12.9□□□□□ -0.34
CACNB3-209ENST00000548860 MAPK3P27361 379 aaPredicted RBP12.9□□□□□ -0.34
CACNB3-209ENST00000548860 METTL8Q9H825 291 aaKnown RBP12.9□□□□□ -0.34
CACNB3-209ENST00000548860 CHD9Q3L8U1 2897 aa12.9□□□□□ -0.34
CACNB3-209ENST00000548860 SPTA1P02549 2419 aa12.9□□□□□ -0.35
CACNB3-209ENST00000548860 TRAV8-7A0A075B6U6 113 aa12.9□□□□□ -0.35
CACNB3-209ENST00000548860 IGHV5-51A0A0C4DH38 117 aa12.9□□□□□ -0.35
CACNB3-209ENST00000548860 METTL12A8MUP2 240 aa12.9□□□□□ -0.35
CACNB3-209ENST00000548860 RAF1P04049 648 aa12.9□□□□□ -0.35
CACNB3-209ENST00000548860 POU3F2P20265 443 aaPredicted RBP12.9□□□□□ -0.35
CACNB3-209ENST00000548860 ENDOUP21128 410 aaKnown RBP12.9□□□□□ -0.35
CACNB3-209ENST00000548860 FBLP22087 321 aaKnown RBP12.9□□□□□ -0.35
CACNB3-209ENST00000548860 DHPSP49366 369 aaPredicted RBP12.9□□□□□ -0.35
CACNB3-209ENST00000548860 RPS15P62841 145 aaKnown RBP12.9□□□□□ -0.35
CACNB3-209ENST00000548860 TLE3Q04726 772 aa12.9□□□□□ -0.35
CACNB3-209ENST00000548860 PLA2G7Q13093 441 aa12.9□□□□□ -0.35
CACNB3-209ENST00000548860 ESCO2Q56NI9 601 aa12.9□□□□□ -0.35
CACNB3-209ENST00000548860 RAB12Q6IQ22 244 aa12.9□□□□□ -0.35
CACNB3-209ENST00000548860 MS4A7Q9GZW8 240 aaPredicted RBP12.9□□□□□ -0.35
CACNB3-209ENST00000548860 SLC6A15Q9H2J7 730 aa12.9□□□□□ -0.35
CACNB3-209ENST00000548860 ANKRD10Q9NXR5 420 aa12.9□□□□□ -0.35
CACNB3-209ENST00000548860 TAS2R4Q9NYW5 299 aa12.9□□□□□ -0.35
CACNB3-209ENST00000548860 F5H5K5 113 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 PLPP2O43688 288 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 KNG1P01042 644 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 CCNOP22674 350 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 NUP62P37198 522 aaPredicted RBP12.89□□□□□ -0.35
CACNB3-209ENST00000548860 OR3A2P47893 321 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 ELOCQ15369 112 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 ACKR1Q16570 336 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 LPAL2Q16609 132 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 SLC22A6Q4U2R8 563 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 LCN10Q6JVE6 187 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 LANCL3Q6ZV70 420 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 CREB3L2Q70SY1 520 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 RASGRP3Q8IV61 690 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 ARIH2OSQ8N7S6 290 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 ZNF417Q8TAU3 575 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 ANKRD9Q96BM1 317 aaPredicted RBP12.89□□□□□ -0.35
CACNB3-209ENST00000548860 ZNF587Q96SQ5 575 aaPredicted RBP12.89□□□□□ -0.35
CACNB3-209ENST00000548860 CUTCQ9NTM9 273 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 ZNF701Q9NV72 531 aaPredicted RBP12.89□□□□□ -0.35
CACNB3-209ENST00000548860 EXOGQ9Y2C4 368 aaKnown RBP12.89□□□□□ -0.35
CACNB3-209ENST00000548860 ENTPD2Q9Y5L3 495 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 NPFFR2Q9Y5X5 522 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 TCRBV16S1A1N1A0A5B0 115 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 ZNF878C9JN71 531 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 TBX19O60806 448 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 GLCEO94923 617 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 GLT8D1Q68CQ7 371 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 DPY19L2P2Q6ZN68 376 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 TMPRSS11FQ6ZWK6 438 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 KCTD20Q7Z5Y7 419 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 OR4D10Q8NGI6 311 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 ST6GALNAC5Q9BVH7 336 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 HPF1Q9NWY4 346 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 OR5V1Q9UGF6 321 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 FREM3P0C091 2139 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 PLXNA3P51805 1871 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 CFIP05156 583 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 EFNB2P52799 333 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 PRAMEF8Q5VWM4 474 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 PRAMEF7Q5VXH5 474 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 SLC18B1Q6NT16 456 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 KCTD18Q6PI47 426 aaPredicted RBP12.89□□□□□ -0.35
CACNB3-209ENST00000548860 TMEM205Q6UW68 189 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 MAMDC2Q7Z304 686 aaPredicted RBP12.89□□□□□ -0.35
CACNB3-209ENST00000548860 SLC38A6Q8IZM9 456 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 OR6V1Q8N148 313 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 ACKR4Q9NPB9 350 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 DZANK1Q9NVP4 752 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 SCP2D1Q9UJQ7 156 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 B9D1Q9UPM9 204 aa12.89□□□□□ -0.35
CACNB3-209ENST00000548860 MN1Q10571 1320 aaPredicted RBP12.88□□□□□ -0.35
CACNB3-209ENST00000548860 SUSD5O60279 629 aa12.88□□□□□ -0.35
CACNB3-209ENST00000548860 IGHA1P01876 353 aa12.88□□□□□ -0.35
CACNB3-209ENST00000548860 M6PRP20645 277 aa12.88□□□□□ -0.35
CACNB3-209ENST00000548860 HYAL1Q12794 435 aa12.88□□□□□ -0.35
CACNB3-209ENST00000548860 RNASE10Q5GAN6 216 aaKnown RBP12.88□□□□□ -0.35
CACNB3-209ENST00000548860 C19orf48Q6RUI8 117 aa12.88□□□□□ -0.35
CACNB3-209ENST00000548860 TEX261Q6UWH6 196 aa12.88□□□□□ -0.35
CACNB3-209ENST00000548860 NPSR1Q6W5P4 371 aa12.88□□□□□ -0.35
CACNB3-209ENST00000548860 BPIFB2Q8N4F0 458 aa12.88□□□□□ -0.35
CACNB3-209ENST00000548860 ZNF283Q8N7M2 679 aa12.88□□□□□ -0.35
CACNB3-209ENST00000548860 OR6N1Q8NGY5 312 aa12.88□□□□□ -0.35
CACNB3-209ENST00000548860 OR2AJ1Q8NGZ0 328 aa12.88□□□□□ -0.35
CACNB3-209ENST00000548860 FGGYQ96C11 551 aa12.88□□□□□ -0.35
CACNB3-209ENST00000548860 ZNF578Q96N58 590 aaPredicted RBP12.88□□□□□ -0.35
CACNB3-209ENST00000548860 GAS2L1Q99501 681 aaPredicted RBP12.88□□□□□ -0.35
CACNB3-209ENST00000548860 SELENOIQ9C0D9 397 aa12.88□□□□□ -0.35
CACNB3-209ENST00000548860 PARP12Q9H0J9 701 aaKnown RBP12.88□□□□□ -0.35
CACNB3-209ENST00000548860 BANF2Q9H503 90 aa12.88□□□□□ -0.35
CACNB3-209ENST00000548860 TREM1Q9NP99 234 aa12.88□□□□□ -0.35
CACNB3-209ENST00000548860 U3KQ87 197 aa12.88□□□□□ -0.35
CACNB3-209ENST00000548860 KANTRA0A1W2PQU2 76 aa12.88□□□□□ -0.35
CACNB3-209ENST00000548860 F5H5P2 479 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms