RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 CDC42EP3Q9UKI2 254 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 FZR1Q9UM11 496 aa5.79□□□□□ -1.48
SCAF11-211ENST00000547950 FBN1P35555 2871 aaKnown RBP5.78□□□□□ -1.48
SCAF11-211ENST00000547950 MRASO14807 208 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 PHF1O43189 567 aaPredicted RBP5.78□□□□□ -1.48
SCAF11-211ENST00000547950 SASH3O75995 380 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 STAMBPO95630 424 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 RAB36O95755 333 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 BCL10O95999 233 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 F13BP05160 661 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 VIMP08670 466 aaKnown RBP5.78□□□□□ -1.48
SCAF11-211ENST00000547950 QDPRP09417 244 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 OR8G3PP0DMU2 310 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 TROVE2P10155 538 aaKnown RBP eCLIP5.78□□□□□ -1.48
SCAF11-211ENST00000547950 ZNF35P13682 527 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 ZNF14P17017 642 aaPredicted RBP5.78□□□□□ -1.48
SCAF11-211ENST00000547950 FUT1P19526 365 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 TNFRSF1BP20333 461 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 PCGF2P35227 344 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 OR1E2P47887 323 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 GZMMP51124 257 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 ARFIP2P53365 341 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 TAS2R41P59536 307 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 GALK2Q01415 458 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 ZP4Q12836 540 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 KLF10Q13118 480 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 MELKQ14680 651 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 FAM166AQ6J272 317 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 LRFN4Q6PJG9 635 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 DEF8Q6ZN54 512 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 CCDC80Q76M96 950 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 PIWIL3Q7Z3Z3 882 aaKnown RBP5.78□□□□□ -1.48
SCAF11-211ENST00000547950 LRP11Q86VZ4 500 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 CARM1Q86X55 608 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 SLC22A24Q8N4F4 322 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 SYT14Q8NB59 555 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 SPATA3Q8NHX4 192 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 FGFBP3Q8TAT2 258 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 UBASH3BQ8TF42 649 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 C10orf82Q8WW14 230 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 NEU4Q8WWR8 484 aaPredicted RBP5.78□□□□□ -1.48
SCAF11-211ENST00000547950 RASSF5Q8WWW0 418 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 STON2Q8WXE9 905 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 TMEM54Q969K7 222 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 LRRC58Q96CX6 371 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 SLC25A44Q96H78 314 aaPredicted RBP5.78□□□□□ -1.48
SCAF11-211ENST00000547950 MPP4Q96JB8 637 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 ZNF75AQ96N20 296 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 SYT3Q9BQG1 590 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 SIKE1Q9BRV8 207 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 MRPL37Q9BZE1 423 aaKnown RBP5.78□□□□□ -1.48
SCAF11-211ENST00000547950 BPESC1Q9GZL8 116 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 RNF121Q9H920 327 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 VIPAS39Q9H9C1 493 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 MYOZ1Q9NP98 299 aaPredicted RBP5.78□□□□□ -1.48
SCAF11-211ENST00000547950 MEPEQ9NQ76 525 aaPredicted RBP5.78□□□□□ -1.48
SCAF11-211ENST00000547950 GLTPQ9NZD2 209 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 LPAR3Q9UBY5 353 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 REV1Q9UBZ9 1251 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 RIMS3Q9UJD0 308 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 ZNF229Q9UJW7 825 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 FBXO9Q9UK97 447 aaPredicted RBP5.78□□□□□ -1.48
SCAF11-211ENST00000547950 KCNS2Q9ULS6 477 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 CADP27708 2225 aa5.78□□□□□ -1.48
SCAF11-211ENST00000547950 A0A1W2PRG6 482 aa5.77□□□□□ -1.49
SCAF11-211ENST00000547950 MCIDASD6RGH6 385 aa5.77□□□□□ -1.49
SCAF11-211ENST00000547950 DHHO43323 396 aa5.77□□□□□ -1.49
SCAF11-211ENST00000547950 SYNGR3O43761 229 aa5.77□□□□□ -1.49
SCAF11-211ENST00000547950 UBL3O95164 117 aa5.77□□□□□ -1.49
SCAF11-211ENST00000547950 FARS2O95363 451 aaKnown RBP5.77□□□□□ -1.49
SCAF11-211ENST00000547950 IFNA14P01570 189 aa5.77□□□□□ -1.49
SCAF11-211ENST00000547950 MT-ND1P03886 318 aa5.77□□□□□ -1.49
SCAF11-211ENST00000547950 SERPINA5P05154 406 aa5.77□□□□□ -1.49
SCAF11-211ENST00000547950 IGFBP1P08833 259 aaPredicted RBP5.77□□□□□ -1.49
SCAF11-211ENST00000547950 ASAH2BP0C7U1 165 aa5.77□□□□□ -1.49
SCAF11-211ENST00000547950 CCL2P13500 99 aa5.77□□□□□ -1.49
SCAF11-211ENST00000547950 H2AFXP16104 143 aaPredicted RBP5.77□□□□□ -1.49
SCAF11-211ENST00000547950 ZNF23P17027 643 aa5.77□□□□□ -1.49
SCAF11-211ENST00000547950 SRD5A1P18405 259 aa5.77□□□□□ -1.49
SCAF11-211ENST00000547950 IGFBP5P24593 272 aa5.77□□□□□ -1.49
SCAF11-211ENST00000547950 COL8A2P25067 703 aa5.77□□□□□ -1.49
SCAF11-211ENST00000547950 APEX1P27695 318 aaKnown RBP5.77□□□□□ -1.49
SCAF11-211ENST00000547950 LSP1P33241 339 aa5.77□□□□□ -1.49
SCAF11-211ENST00000547950 GLRXP35754 106 aa5.77□□□□□ -1.49
SCAF11-211ENST00000547950 AQP2P41181 271 aa5.77□□□□□ -1.49
SCAF11-211ENST00000547950 ALDH3B1P43353 468 aa5.77□□□□□ -1.49
SCAF11-211ENST00000547950 CRYBA2P53672 197 aa5.77□□□□□ -1.49
SCAF11-211ENST00000547950 SEC24CP53992 1094 aa5.77□□□□□ -1.49
SCAF11-211ENST00000547950 CLRN1P58418 232 aa5.77□□□□□ -1.49
SCAF11-211ENST00000547950 MYBPC1Q00872 1141 aa5.77□□□□□ -1.49
SCAF11-211ENST00000547950 SRSF2Q01130 221 aaKnown RBP5.77□□□□□ -1.49
SCAF11-211ENST00000547950 RUNX1T1Q06455 604 aa5.77□□□□□ -1.49
SCAF11-211ENST00000547950 RPL18Q07020 188 aaKnown RBP5.77□□□□□ -1.49
SCAF11-211ENST00000547950 PIN1Q13526 163 aaPredicted RBP5.77□□□□□ -1.49
SCAF11-211ENST00000547950 MAD2L1BPQ15013 274 aaPredicted RBP5.77□□□□□ -1.49
SCAF11-211ENST00000547950 MSMPQ1L6U9 139 aa5.77□□□□□ -1.49
SCAF11-211ENST00000547950 ALKBH6Q3KRA9 238 aa5.77□□□□□ -1.49
SCAF11-211ENST00000547950 FAM120AOSQ5T036 256 aa5.77□□□□□ -1.49
SCAF11-211ENST00000547950 REP15Q6BDI9 236 aa5.77□□□□□ -1.49
SCAF11-211ENST00000547950 TMEM53Q6P2H8 277 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms