RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 HLA-AP01891 365 aaKnown RBP9.74□□□□□ -0.85
NPAS3-205ENST00000547068 APEHP13798 732 aaKnown RBP9.74□□□□□ -0.85
NPAS3-205ENST00000547068 HIST1H1CP16403 213 aaKnown RBP9.74□□□□□ -0.85
NPAS3-205ENST00000547068 GRPRP30550 384 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 PGDP52209 483 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 EFNB2P52799 333 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 GGTLC2Q14390 218 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 Q3ZCU0 254 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 NKAPLQ5M9Q1 402 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 NKAIN2Q5VXU1 208 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 BAP18Q8IXM2 172 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 SAMD14Q8IZD0 417 aaPredicted RBP9.74□□□□□ -0.85
NPAS3-205ENST00000547068 DEFB123Q8N688 67 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 ZBTB8AQ96BR9 441 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 CDX2Q99626 313 aaPredicted RBP9.74□□□□□ -0.85
NPAS3-205ENST00000547068 SLC46A2Q9BY10 475 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 AICDAQ9GZX7 198 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 TCF20Q9UGU0 1960 aaKnown RBP9.74□□□□□ -0.85
NPAS3-205ENST00000547068 MYOFQ9NZM1 2061 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 WASH3PC4AMC7 463 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 ERI3O43414 337 aaKnown RBP9.74□□□□□ -0.85
NPAS3-205ENST00000547068 CLN5O75503 358 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 CLEC3AO75596 197 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 LYPD3O95274 346 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 ZNF14P17017 642 aaPredicted RBP9.74□□□□□ -0.85
NPAS3-205ENST00000547068 PAX6P26367 422 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 CERS1P27544 350 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 RBM34P42696 430 aaKnown RBP9.74□□□□□ -0.85
NPAS3-205ENST00000547068 TAS2R19P59542 299 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 ACTBP60709 375 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 ACTG1P63261 375 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 OR2B11Q5JQS5 317 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 ATPAF1Q5TC12 328 aaPredicted RBP9.74□□□□□ -0.85
NPAS3-205ENST00000547068 DBX2Q6ZNG2 339 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 DPPA4Q7L190 304 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 ZNF547Q8IVP9 402 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 OR51D1Q8NGF3 324 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 OR6K6Q8NGW6 343 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 TCTEX1D2Q8WW35 142 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 TMED6Q8WW62 240 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 TFGQ92734 400 aaPredicted RBP9.74□□□□□ -0.85
NPAS3-205ENST00000547068 HIST1H2BAQ96A08 127 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 LMLNQ96KR4 655 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 CLCC1Q96S66 551 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 PFDN5Q99471 154 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 NAA11Q9BSU3 229 aaPredicted RBP9.74□□□□□ -0.85
NPAS3-205ENST00000547068 GPR174Q9BXC1 333 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 HRH4Q9H3N8 390 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 RHOFQ9HBH0 211 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 CLEC1BQ9P126 229 aa9.74□□□□□ -0.85
NPAS3-205ENST00000547068 CXorf51AA0A1B0GTR3 108 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 CPED1A4D0V7 1026 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 K7ESM1 405 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 M0QYG6 137 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 WNT11O96014 354 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 CD74P04233 296 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 AMY2AP04746 511 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 CTSLP07711 333 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 SFTA3P0C7M3 94 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 PGAM2P15259 253 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 FOSL2P15408 326 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 MUC1P15941 1255 aaPredicted RBP9.73□□□□□ -0.85
NPAS3-205ENST00000547068 AK4P27144 223 aaPredicted RBP9.73□□□□□ -0.85
NPAS3-205ENST00000547068 F2RL1P55085 397 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 SLC7A9P82251 487 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 DUSP8Q13202 625 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 NR0B2Q15466 257 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 CDNFQ49AH0 187 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 PRRT3Q5FWE3 981 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 MRPL2Q5T653 305 aaKnown RBP9.73□□□□□ -0.85
NPAS3-205ENST00000547068 SLC48A1Q6P1K1 146 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 FAM111BQ6SJ93 734 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 TMEM205Q6UW68 189 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 Q7L0L9 218 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 ACOT4Q8N9L9 421 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 SLC30A7Q8NEW0 376 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 OR5AK2Q8NH90 309 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 RPS4Y2Q8TD47 263 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 GRHL3Q8TE85 626 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 ZNRF4Q8WWF5 429 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 ARSGQ96EG1 525 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 MYADMQ96S97 322 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 WDR77Q9BQA1 342 aaPredicted RBP9.73□□□□□ -0.85
NPAS3-205ENST00000547068 ZNF559Q9BR84 538 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 OR52A5Q9H2C5 316 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 C6orf106Q9H6K1 298 aaPredicted RBP9.73□□□□□ -0.85
NPAS3-205ENST00000547068 ZNF780BQ9Y6R6 833 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 OBSL1O75147 1896 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 A0A1B0GVT2 93 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 F8VVB4 439 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 F8VWA3 439 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 ST8SIA5O15466 376 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 ZNF208O43345 1280 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 MOSPD3O75425 235 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 AGAP20933 346 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 HIST1H1TP22492 207 aaPredicted RBP9.73□□□□□ -0.85
NPAS3-205ENST00000547068 CPT2P23786 658 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 EIF2S3P41091 472 aaKnown RBP9.73□□□□□ -0.85
NPAS3-205ENST00000547068 DIO1P49895 249 aa9.73□□□□□ -0.85
NPAS3-205ENST00000547068 SCAND1P57086 179 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms