RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 TMEM225Q6GV28 225 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 ZNF770Q6IQ21 691 aaPredicted RBP5.6□□□□□ -1.51
PRKDC-211ENST00000546304 HMBOX1Q6NT76 420 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 SHQ1Q6PI26 577 aaKnown RBP5.6□□□□□ -1.51
PRKDC-211ENST00000546304 TFAP2EQ6VUC0 442 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 ZNF620Q6ZNG0 422 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 TMPRSS11FQ6ZWK6 438 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 HIST3H2AQ7L7L0 130 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 PXKQ7Z7A4 578 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 ZER1Q7Z7L7 766 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 GALNT5Q7Z7M9 940 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 TMEM179BQ7Z7N9 219 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 MRGPRGQ86SM5 289 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 JAZF1Q86VZ6 243 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 EPHX4Q8IUS5 362 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 C10orf67Q8IYJ2 551 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 CDK20Q8IZL9 346 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 HS3ST5Q8IZT8 346 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 KDM8Q8N371 416 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 SYT8Q8NBV8 401 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 OR51A7Q8NH64 312 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 MOSPD2Q8NHP6 518 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 GIPC3Q8TF64 312 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 SSC4DQ8WTU2 575 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 CA5BP1Q8WTZ4 195 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 LRTOMTQ8WZ04 291 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 HIST1H2ACQ93077 130 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 TMEM45BQ96B21 275 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 OXGR1Q96P68 337 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 ZNF385AQ96PM9 386 aaKnown RBP5.6□□□□□ -1.51
PRKDC-211ENST00000546304 ALKBH3Q96Q83 286 aaPredicted RBP5.6□□□□□ -1.51
PRKDC-211ENST00000546304 GPA33Q99795 319 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 BDH2Q9BUT1 245 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 CDIP1Q9H305 208 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 PIGMQ9H3S5 423 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 NTN4Q9HB63 628 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 MCCC2Q9HCC0 563 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 S100A14Q9HCY8 104 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 FANCFQ9NPI8 374 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 ZNF629Q9UEG4 869 aaPredicted RBP5.6□□□□□ -1.51
PRKDC-211ENST00000546304 OAZ3Q9UMX2 235 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 PROCRQ9UNN8 238 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 RCE1Q9Y256 329 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 SIGLEC7Q9Y286 467 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 NOSIPQ9Y314 301 aaKnown RBP5.6□□□□□ -1.51
PRKDC-211ENST00000546304 NOX1Q9Y5S8 564 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 CDH10Q9Y6N8 788 aa5.6□□□□□ -1.51
PRKDC-211ENST00000546304 CELSR2Q9HCU4 2923 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 LOC102725191A0A1B0GVB3 256 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 A0A1W2PRG6 482 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 UNC119BA6NIH7 251 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 NPIPB13A6NJU9 1138 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 SAC3D1A6NKF1 404 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 NPIPB4C9JG80 1138 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 MCIDASD6RGH6 385 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 BLOC1S5-TXNDC5H3BN57 136 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 MRPL33O75394 65 aaKnown RBP5.59□□□□□ -1.51
PRKDC-211ENST00000546304 NDUFB2O95178 105 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 SOX14O95416 240 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 CLDN14O95500 239 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 IGHMP01871 453 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 HLA-DOBP13765 273 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 POU2F1P14859 743 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 ZNF26P17031 533 aaPredicted RBP5.59□□□□□ -1.51
PRKDC-211ENST00000546304 GSTM3P21266 225 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 EDNRAP25101 427 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 CCKARP32238 428 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 RPL4P36578 427 aaKnown RBP5.59□□□□□ -1.51
PRKDC-211ENST00000546304 OR3A2P47893 321 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 ASCL1P50553 236 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 DAP3P51398 398 aaKnown RBP5.59□□□□□ -1.51
PRKDC-211ENST00000546304 ARHGDIAP52565 204 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 CLDN17P56750 224 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 FXYD6P3P58550 94 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 PRPS1P60891 318 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 ZP4Q12836 540 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 TSPAN31Q12999 210 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 TOP3AQ13472 1001 aaPredicted RBP5.59□□□□□ -1.51
PRKDC-211ENST00000546304 FHL1Q13642 323 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 MELKQ14680 651 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 RCN1Q15293 331 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 CDSNQ15517 529 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 TAF11Q15544 211 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 ZBED5Q49AG3 693 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 RPL13AP3Q6NVV1 102 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 C1orf94Q6P1W5 598 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 XKRXQ6PP77 449 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 SMARCD3Q6STE5 483 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 CREB3L2Q70SY1 520 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 AAED1Q7RTV5 226 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 NUFIP2Q7Z417 695 aaKnown RBP5.59□□□□□ -1.51
PRKDC-211ENST00000546304 HDDC2Q7Z4H3 204 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 AMIGO2Q86SJ2 522 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 LUZP2Q86TE4 346 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 STK32CQ86UX6 486 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 IGFN1Q86VF2 1251 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 HIPK1Q86Z02 1210 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 LIX1LQ8IVB5 337 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 PQLC1Q8N2U9 271 aa5.59□□□□□ -1.51
PRKDC-211ENST00000546304 SVOPLQ8N434 492 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms