RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 POU3F4P49335 361 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 IGLV3-21P80748 117 aaPredicted RBP7.94□□□□□ -1.14
TDP1-204ENST00000545686 SORDQ00796 357 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 DMWDQ09019 674 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 GPR18Q14330 331 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 ETFDHQ16134 617 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 WBP2NLQ6ICG8 309 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 TMEM229BQ8NBD8 167 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 RCBTB1Q8NDN9 531 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 OR4D10Q8NGI6 311 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 ST8SIA2Q92186 375 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 PHYHIPLQ96FC7 376 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 C4orf45Q96LM5 186 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 DCBLD2Q96PD2 775 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 GPR174Q9BXC1 333 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 SEMA4CQ9C0C4 833 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 SLCO5A1Q9H2Y9 848 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 FKRPQ9H9S5 495 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 MMP25Q9NPA2 562 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 IKZF2Q9UKS7 526 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 COL5A1P20908 1838 aaPredicted RBP7.94□□□□□ -1.14
TDP1-204ENST00000545686 TRAV18A0A075B6X5 111 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 TRAV14DV4A0A0A6YYC5 116 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 FAM171A2A8MVW0 826 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 SLC31A1O15431 190 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 EIF4E2O60573 245 aaKnown RBP7.94□□□□□ -1.14
TDP1-204ENST00000545686 OR2F2O95006 317 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 SPDEFO95238 335 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 RENP00797 406 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 ASAH2BP0C7U1 165 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 CTXN1P60606 82 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 OC90Q02509 493 aaPredicted RBP7.94□□□□□ -1.14
TDP1-204ENST00000545686 PLA2G7Q13093 441 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 OR2F1Q13607 317 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 ZNF169Q14929 603 aaPredicted RBP7.94□□□□□ -1.14
TDP1-204ENST00000545686 FAM166AQ6J272 317 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 LRFN4Q6PJG9 635 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 ENPP7Q6UWV6 458 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 MOB3CQ70IA8 216 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 ATG4DQ86TL0 474 aaPredicted RBP7.94□□□□□ -1.14
TDP1-204ENST00000545686 CCDC36Q8IYA8 594 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 GABRG1Q8N1C3 465 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 KCNRGQ8N5I3 272 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 C12orf45Q8N5I9 185 aaPredicted RBP7.94□□□□□ -1.14
TDP1-204ENST00000545686 CLRN3Q8NCR9 226 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 DMRTA2Q96SC8 542 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 ZNF416Q9BWM5 594 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 POFUT1Q9H488 388 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 GPN3Q9UHW5 284 aaPredicted RBP7.94□□□□□ -1.14
TDP1-204ENST00000545686 ERVK-19Q9WJR5 959 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 KIF26BQ2KJY2 2108 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 TBC1D3DA0A087WVF3 549 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 A0A0A6YYH2 397 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 A0A1B0GTI1 187 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.93□□□□□ -1.14
TDP1-204ENST00000545686 TMEM82A0PJX8 343 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 POM121BA6NF01 834 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 A6NJ64 397 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 TBC1D3LB9A6J9 549 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 BLOC1S5-TXNDC5H3BN57 136 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 TNFRSF10CO14798 259 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 RDH16O75452 317 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 CD3DP04234 171 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 OR4E1P0C645 316 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 TBC1D3HP0C7X1 549 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 SLC25A4P12235 298 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 EFNB2P52799 333 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 FLI1Q01543 452 aaPredicted RBP7.93□□□□□ -1.14
TDP1-204ENST00000545686 LY6G6FQ5SQ64 297 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 EEF1A1P5Q5VTE0 462 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 TBC1D3CQ6IPX1 549 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 TMEM205Q6UW68 189 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 TBC1D3Q8IZP1 549 aaPredicted RBP7.93□□□□□ -1.14
TDP1-204ENST00000545686 PRSS35Q8N3Z0 413 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 BCORP1Q8N888 145 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 OR51D1Q8NGF3 324 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 OR5M8Q8NGP6 311 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 OR6N2Q8NGY6 317 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 ADAMTS18Q8TE60 1221 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 FAM3DQ96BQ1 224 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 INTS14Q96SY0 518 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 BARX1Q9HBU1 254 aaPredicted RBP7.93□□□□□ -1.14
TDP1-204ENST00000545686 PCDHB16Q9NRJ7 776 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 GRHPRQ9UBQ7 328 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 PLCL2Q9UPR0 1127 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 KANTRA0A1W2PQU2 76 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 CHURC1-FNTBB4DL54 471 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 H0YC42 278 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 DNASE2O00115 360 aaPredicted RBP7.93□□□□□ -1.14
TDP1-204ENST00000545686 BCL2L11O43521 198 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 RASGRP1O95267 797 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 ITGA5P08648 1049 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 CT45A8P0DMV1 189 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 CT45A9P0DMV2 189 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 KIR3DL2P43630 455 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 LSSP48449 732 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 UBE2MP61081 183 aaKnown RBP7.93□□□□□ -1.14
TDP1-204ENST00000545686 SKP1P63208 163 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 GUCA2AQ02747 115 aa7.93□□□□□ -1.14
TDP1-204ENST00000545686 KLHL26Q53HC5 615 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms