RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-219	ENST00000543660	MIPOL1	Q8TD10	442 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	UBLCP1	Q8WVY7	318 aa	Predicted RBP	4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ST8SIA2	Q92186	375 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	EXT2	Q93063	718 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	CCT8L2	Q96SF2	557 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SERPINI1	Q99574	410 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ZBTB18	Q99592	522 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	DOK1	Q99704	481 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	CITED1	Q99966	193 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	NAT9	Q9BTE0	207 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	NARFL	Q9H6Q4	476 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	CAB39L	Q9H9S4	337 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SLC52A3	Q9NQ40	469 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SLC17A5	Q9NRA2	495 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ASB6	Q9NWX5	421 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	TAS2R9	Q9NYW1	312 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	TREM2	Q9NZC2	230 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	MALT1	Q9UDY8	824 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	OPN4	Q9UHM6	478 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	UTS2R	Q9UKP6	389 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	NDRG4	Q9ULP0	352 aa	Known RBP	4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	DHDH	Q9UQ10	334 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ACOT9	Q9Y305	439 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	RNF11	Q9Y3C5	154 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	MMP24	Q9Y5R2	645 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	TEX264	Q9Y6I9	313 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ZNF780B	Q9Y6R6	833 aa		4.15	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ARHGAP32	A7KAX9	2087 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	IGKV3D-15	A0A087WSY6	115 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	IGHV1-18	A0A0C4DH31	117 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	LOC100653049	A0A140TA62	436 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	NPIPB13	A6NJU9	1138 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	GJE1	A6NN92	205 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	NPIPB5	A8MRT5	1133 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	NPIPB4	C9JG80	1138 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660		F8WDY8	70 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660		M0QZ24	198 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	EBAG9	O00559	213 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PLPP2	O43688	288 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	UGDH	O60701	494 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SHOX2	O60902	331 aa	Predicted RBP	4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ERLIN1	O75477	346 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	KRT34	O76011	436 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	NKX2-2	O95096	273 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PSMG1	O95456	288 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	OXSR1	O95747	527 aa	Predicted RBP	4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PAH	P00439	452 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PRB2	P02812	416 aa	Predicted RBP	4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ERCC1	P07992	297 aa	Predicted RBP	4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	NGFR	P08138	427 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SBK2	P0C263	348 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SAG	P10523	405 aa	Predicted RBP	4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ZNF182	P17025	639 aa	Predicted RBP	4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	TNFRSF1A	P19438	455 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	COL8A2	P25067	703 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	EIF1	P41567	113 aa	Known RBP	4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	GPR6	P46095	362 aa	Predicted RBP	4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	RFX3	P48380	749 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PSMD4	P55036	377 aa	Known RBP	4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	GALK2	Q01415	458 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ZP4	Q12836	540 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ZNF155	Q12901	538 aa	Predicted RBP	4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	FOXF1	Q12946	379 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	DLG1	Q12959	904 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	RCN1	Q15293	331 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ZNHIT3	Q15649	155 aa	Predicted RBP	4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SMN1	Q16637	294 aa	Known RBP	4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	BEAN1	Q3B7T3	259 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ELFN2	Q5R3F8	820 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	VAX1	Q5SQQ9	334 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	KPRP	Q5T749	579 aa	Predicted RBP	4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	RNASEH2B	Q5TBB1	312 aa	Known RBP	4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	STEAP4	Q687X5	459 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ASPHD2	Q6ICH7	369 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ZCCHC12	Q6PEW1	402 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	LRIG3	Q6UXM1	1119 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	CFAP77	Q6ZQR2	320 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	DOK3	Q7L591	496 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	PAGE2	Q7Z2X7	111 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	NANOGNB	Q7Z5D8	188 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ISCA2	Q86U28	154 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	UBE2J2	Q8N2K1	259 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	C17orf78	Q8N4C9	275 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	GATS	Q8NAP1	163 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	OR52E4	Q8NGH9	312 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	STAG3L4	Q8TBR4	150 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ZFP90	Q8TF47	636 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	GLMP	Q8WWB7	406 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	MAIP1	Q8WWC4	291 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ZNF524	Q96C55	264 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	SH3YL1	Q96HL8	342 aa	Predicted RBP	4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ATP6V1G3	Q96LB4	118 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	HARBI1	Q96MB7	349 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ATOH8	Q96SQ7	321 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	RBM4B	Q9BQ04	359 aa	Known RBP	4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ZNF416	Q9BWM5	594 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	RSPO3	Q9BXY4	272 aa	Predicted RBP	4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	RHOJ	Q9H4E5	214 aa		4.14	□□□□□ -1.75
NPIPB4-219	ENST00000543660	ALG9	Q9H6U8	611 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms