RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 GID4Q8IVV7 300 aa10.53□□□□□ -0.72
DDB1-223ENST00000543658 C20orf196Q8IYI0 205 aa10.53□□□□□ -0.72
DDB1-223ENST00000543658 PROKR2Q8NFJ6 384 aa10.53□□□□□ -0.72
DDB1-223ENST00000543658 OR2T4Q8NH00 348 aa10.53□□□□□ -0.72
DDB1-223ENST00000543658 ASB5Q8WWX0 329 aa10.53□□□□□ -0.72
DDB1-223ENST00000543658 LRR1Q96L50 414 aa10.53□□□□□ -0.72
DDB1-223ENST00000543658 CNBD2Q96M20 576 aa10.53□□□□□ -0.72
DDB1-223ENST00000543658 Q96MT0 163 aa10.53□□□□□ -0.72
DDB1-223ENST00000543658 MUS81Q96NY9 551 aa10.53□□□□□ -0.72
DDB1-223ENST00000543658 ALKBH3Q96Q83 286 aaPredicted RBP10.53□□□□□ -0.72
DDB1-223ENST00000543658 DMRTA2Q96SC8 542 aa10.53□□□□□ -0.72
DDB1-223ENST00000543658 KCNK17Q96T54 332 aa10.53□□□□□ -0.72
DDB1-223ENST00000543658 LINC00470Q9BZP3 86 aa10.53□□□□□ -0.72
DDB1-223ENST00000543658 RASSF1Q9NS23 344 aa10.53□□□□□ -0.72
DDB1-223ENST00000543658 VSX1Q9NZR4 365 aaPredicted RBP10.53□□□□□ -0.72
DDB1-223ENST00000543658 KMT2BQ9UMN6 2715 aaPredicted RBP10.53□□□□□ -0.72
DDB1-223ENST00000543658 A0A0G2JNJ9 132 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 A0A1W2PPL8 197 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 SLC22A23A1A5C7 686 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 FAM183AA6NL82 134 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 LRRTM2O43300 516 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 SLC16A7O60669 478 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 KHDRBS3O75525 346 aaKnown RBP10.52□□□□□ -0.73
DDB1-223ENST00000543658 ZNF432O94892 652 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 IGHV3-9P01782 118 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 HLA-DQA2P01906 255 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 QDPRP09417 244 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 KIR2DL2P43627 348 aaPredicted RBP10.52□□□□□ -0.73
DDB1-223ENST00000543658 RUNX1T1Q06455 604 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 FAPQ12884 760 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 MED21Q13503 144 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 GUSBP1Q15486 140 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 MEDAGQ5VYS4 303 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 NXNL2Q5VZ03 156 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 TFAP2EQ6VUC0 442 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 BEND4Q6ZU67 534 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 NCCRP1Q6ZVX7 275 aaPredicted RBP10.52□□□□□ -0.73
DDB1-223ENST00000543658 THAP5Q7Z6K1 395 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 CPOQ8IVL8 374 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 ENTHD1Q8IYW4 607 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 TMEM123Q8N131 208 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 MARVELD2Q8N4S9 558 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 NAXEQ8NCW5 288 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 NPEPL1Q8NDH3 523 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 OR9Q1Q8NGQ5 310 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 NSMAFQ92636 917 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 RFKQ969G6 155 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 TMEM54Q969K7 222 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 LRRC46Q96FV0 321 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 RBM24Q9BX46 236 aaKnown RBP10.52□□□□□ -0.73
DDB1-223ENST00000543658 ANKRD60Q9BZ19 345 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 OR51V1Q9H2C8 321 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 HINT3Q9NQE9 182 aaKnown RBP10.52□□□□□ -0.73
DDB1-223ENST00000543658 ZNF629Q9UEG4 869 aaPredicted RBP10.52□□□□□ -0.73
DDB1-223ENST00000543658 Q9UFV3 132 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 RNF6Q9Y252 685 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 FKBP7Q9Y680 259 aa10.52□□□□□ -0.73
DDB1-223ENST00000543658 NCOA6Q14686 2063 aaPredicted RBP10.52□□□□□ -0.73
DDB1-223ENST00000543658 SPENQ96T58 3664 aaKnown RBP10.52□□□□□ -0.73
DDB1-223ENST00000543658 RP1L1Q8IWN7 2480 aaPredicted RBP10.51□□□□□ -0.73
DDB1-223ENST00000543658 ALPK2Q86TB3 2170 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 OR6C68A6NDL8 312 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 PRODHO43272 600 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 DHHO43323 396 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 UPK3AO75631 287 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 TNFSF13O75888 250 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 CNOT4O95628 575 aaKnown RBP10.51□□□□□ -0.73
DDB1-223ENST00000543658 CD8BP10966 210 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 MYF6P23409 242 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 CHRNB4P30926 498 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 BLVRAP53004 296 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 SLC25A1P53007 311 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 CDH11P55287 796 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 SNRPGP62308 76 aaKnown RBP10.51□□□□□ -0.73
DDB1-223ENST00000543658 ROR2Q01974 943 aaKnown RBP10.51□□□□□ -0.73
DDB1-223ENST00000543658 GLO1Q04760 184 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 FMODQ06828 376 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 MAD2L1BPQ15013 274 aaPredicted RBP10.51□□□□□ -0.73
DDB1-223ENST00000543658 SLC35D3Q5M8T2 416 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 TSPO2Q5TGU0 170 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 FBXW9Q5XUX1 488 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 NHLRC1Q6VVB1 395 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 BTLAQ7Z6A9 289 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 MRGPRGQ86SM5 289 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 OR6K6Q8NGW6 343 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 MCHR2Q969V1 340 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 MRPL13Q9BYD1 178 aaKnown RBP10.51□□□□□ -0.73
DDB1-223ENST00000543658 NUAK2Q9H093 628 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 RACGAP1Q9H0H5 632 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 CRLF2Q9HC73 371 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 SRA1Q9HD15 236 aaKnown RBP10.51□□□□□ -0.73
DDB1-223ENST00000543658 SLC7A10Q9NS82 523 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 DNAJC27Q9NZQ0 273 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 PRSS50Q9UI38 385 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 FOXD3Q9UJU5 478 aaPredicted RBP10.51□□□□□ -0.73
DDB1-223ENST00000543658 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.51□□□□□ -0.73
DDB1-223ENST00000543658 MOKQ9UQ07 419 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 SLC5A6Q9Y289 635 aa10.51□□□□□ -0.73
DDB1-223ENST00000543658 FAM208BQ5VWN6 2430 aa10.5□□□□□ -0.73
DDB1-223ENST00000543658 CIB4A0PJX0 185 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms